Foundations of Data Science

These lessons will help you get your feet in data science and give you tools to help you slice and dice your data into results.

Material

Data Manipulation Olympics

These tutorials take the same dataset, and show you how to slice and dice it in numerous languages

Bash

These lessons focus on using the Command Line Interface (CLI) and Bash for processing data.

Python

These lessons focus on coding in Python

Python (Modular)

These lessons cover coding in Python except they attempt to be very modular, having few interdependencies, allowing you to re-arrange or insert them in your existing course curriculum as needed.

R

These lessons focus on coding in R

SQL

Here you'll learn to use SQL to query databases and extract meaningful results from them.

Scientific Workflow Management Systems

Here you can find brief tutorials on a couple different workflow engines that you might encounter in the wild.

Introduction to Genomics

A data- and galaxy-driven introduction to genomics

Other

Assorted Tutorials

Learning Pathways

From Zero To Hero with Python

Data analysis and programming are high-demand fields, making them particularly attractive to job seekers and employees across various industries and academic institutions. Are you eager to acquire the foundational skills of coding using the Python programming language? The BioNT consortium is offering a training curriculum for job seekers, SME employers, and everyone who would like to gain new skills in...

python programming introduction beginner

From R to Machine Learning; an introductory course

This learning path aims to teach you the basics of Machine Learning using R. Initially you will learn how to code in R within the Galaxy platform, gaining some familiarity into how to wrangle and analyze data. Then, you will be guided through the various types of Machine Learning techniques, developing some simple models using R.

beginner statistics data-science

Introductory Python

This is an introductory course of Python, as it was taught in Avans Hogeschool in the Netherlands.

python real-course data-science

Introductory SQL

This is an introductory course of SQL, as it was taught in Avans Hogeschool in the Netherlands.

python real-course data-science

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Saskia Hiltemann

Fotis E. Psomopoulos

Bérénice Batut

Yvan Le Bras

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Scott Cain

NU Knight Lab

Yongbin Li

Toby Hodges

Bazante Sanders

Helena Rasche

Saskia Hiltemann

Simon Gladman

Beatriz Serrano-Solano

Wendi Bacon

Fotis E. Psomopoulos

Donny Vrins

Cristóbal Gallardo

Bérénice Batut

Teresa Müller

Marius van den Beek

Nate Coraor

Maria Christina Maniou

Martin Čech

Sofoklis Keisaris

Björn Grüning

Lisanna Paladin

Wandrille Duchemin

Mateusz Kuzak

Anthony Bretaudeau

Peter van Heusden

Anton Nekrutenko

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

The Carpentries

Avans

BioNT

Co-funded by the European Union