12 October 2021
Saskia Hiltemann
Helena Rasche
Bérénice Batut
Anthony Bretaudeau
Yvan Le Bras
Fotis E. Psomopoulos
The CarpentriesAs part of our work under the Gallantries Grant we are establishing a new topic within the GTN specifically focused on Data Science skills. This topic will include tutorials covering things such as:
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Yvan Le Bras
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
- Foundations of Data Science
- Ecology
- Sequence analysis
- Introduction to Galaxy and Ecological data analysis
Tutorials
- Ecology / Visualize EBV cube data with Panoply netCDF viewer
- Ecology / Compute and analyze biodiversity metrics with PAMPA toolsuite
- Ecology / Regional GAM
- Ecology / Sentinel 2 biodiversity ✍️
- Ecology / Obis marine indicators ✍️
- Ecology / Metabarcoding/eDNA through Obitools
- Ecology / Champs blocs indicators
- Ecology / RAD-Seq to construct genetic maps
- Ecology / Biodiversity data exploration ✍️
- Ecology / RAD-Seq de-novo data analysis
- Ecology / Cleaning GBIF data for the use in Ecology
- Ecology / RAD-Seq Reference-based data analysis
- Ecology / Species distribution modeling
- Development in Galaxy / Galaxy Interactive Tools
- Ecology / Production d'indicateurs champs de bloc
Slides
- Variant Analysis / Introduction to Variant analysis
- Epigenetics / Introduction to DNA Methylation data analysis
News