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Anton Nekrutenko

Contributions

The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

GitHub Activity

• github Pull Requests
• github Commits
• github Issues Reported

Tutorials

• Genome Annotation / Comparative gene analysis in unannotated genomes
• Assembly / Making sense of a newly assembled genome
• Assembly / Unicycler Assembly
• Transcriptomics / Reference-based RNAseq data analysis (long)
• Using Galaxy and Managing your Data / Understanding Galaxy history system ✍️
• Using Galaxy and Managing your Data / Searching Your History
• Using Galaxy and Managing your Data / Using dataset collections
• Using Galaxy and Managing your Data / Multisample Analysis
• Introduction to Galaxy Analyses / IGV Introduction
• Introduction to Galaxy Analyses / Galaxy 101
• Introduction to Galaxy Analyses / NGS data logistics
• Variant Analysis / Calling variants in non-diploid systems
• Variant Analysis / Calling very rare variants
• Variant Analysis / Calling variants in diploid systems
• Variant Analysis / From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

Slides

• Assembly / Deeper look into Genome Assembly algorithms
• Assembly / Unicycler Assembly