Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Simon Gladman

Anthony Bretaudeau

Contributors

This material was contributed to by:

Twishi Gulati

Saskia Hiltemann

Felicitas Kindel

Kenji Fujihara

Esteban Perez-Wohlfeil

Delphine Lariviere

Nicola Soranzo

Maria Doyle

Miaomiao Zhou

Romane LIBOUBAN

Ekaterina Polkh

Helena Rasche

Simon Bray

Stéphanie Robin

Teresa Müller

Alexandre Cormier

Laura Leroi

William Durand

Simon Gladman

Bérénice Batut

Jonathan Kreplak

Nathan Dunn

Björn Grüning

Niall Beard

Mateo Boudet

Deepti Varshney

Bazante Sanders

Erwan Corre

Paul Zierep

Jasper Ouwerkerk

Anthony Bretaudeau

Anika Erxleben

Cristóbal Gallardo

Anton Nekrutenko

Anna Syme

Torsten Seemann

Gildas Le Corguillé

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

Avans

IFB

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.