Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

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Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Nicola Soranzo

Stéphanie Robin

Anika Erxleben

Felicitas Kindel

Anthony Bretaudeau

Nathan Dunn

Anton Nekrutenko

Saskia Hiltemann

Alexandre Cormier

Jasper Ouwerkerk

Simon Bray

Miaomiao Zhou

Björn Grüning

Teresa Müller

Simon Gladman

Laura Leroi

Guillaume Gautreau

Ekaterina Polkh

Paul Zierep

Bérénice Batut

Torsten Seemann

Hélène Chiapello

Jonathan Kreplak

Kenji Fujihara

Erwan Corre

Gildas Le Corguillé

Deepti Varshney

Mateo Boudet

Helena Rasche

Niall Beard

Bazante Sanders

Valentin Loux

Twishi Gulati

Esteban Perez-Wohlfeil

Anna Syme

William Durand

Maria Doyle

Delphine Lariviere

Romane LIBOUBAN

Cristóbal Gallardo

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Avans

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

IFB

ABRomics

ELIXIR Europe