Genome Annotation

Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.

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Requirements

Before diving into this topic, we recommend you to have a look at:

• Introduction to Galaxy Analyses

Material

Introduction

Start here if you are new to genome annotation in Galaxy.

Prokaryotes

Annotation of prokaryotic genomes.

Eukaryotes

Annotation of eukaryotic genomes.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Bérénice Batut

Mateo Boudet

Alexandre Cormier

Maria Doyle

Stéphanie Robin

Simon Bray

Erwan Corre

Anthony Bretaudeau

Felicitas Kindel

Torsten Seemann

Gildas Le Corguillé

Anika Erxleben

Paul Zierep

Esteban Perez-Wohlfeil

Delphine Lariviere

Deepti Varshney

Valentin Loux

Cristóbal Gallardo

Nicola Soranzo

Anna Syme

Jasper Ouwerkerk

Laura Leroi

Teresa Müller

Nathan Dunn

Kenji Fujihara

Simon Gladman

Bazante Sanders

Miaomiao Zhou

Helena Rasche

Niall Beard

William Durand

Guillaume Gautreau

Jonathan Kreplak

Twishi Gulati

Björn Grüning

Ekaterina Polkh

Saskia Hiltemann

Anton Nekrutenko

Romane LIBOUBAN

Hélène Chiapello

Funding

These individuals or organisations provided funding support for the development of this resource

IFB

ELIXIR Europe

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

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