Delphine Lariviere
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Favourite Formats
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Tutorials
- Using Galaxy and Managing your Data / Use Jupyter notebooks in Galaxy
- Assembly / Making sense of a newly assembled genome
- Assembly / VGP assembly pipeline
- Assembly / Unicycler Assembly
- Assembly / VGP assembly pipeline - short version
- Genome Annotation / Essential genes detection with Transposon insertion sequencing
Slides
- Assembly / Deeper look into Genome Assembly algorithms
- Assembly / Unicycler Assembly
- Genome Annotation / Essential genes detection with Transposon insertion sequencing
News
We are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline (fig. 1) is now available in the Galaxy Training Network. The Vertebrate Genomes Project aims to generate high-quality, near-error-free, gap-free, chromosome-level, haplotype-phased, annotated reference genome assemblies for every vertebrate species.
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Every 3 months we organise one day dedicated to the GTN community! Thursday, May 20th is the next GTN CoFest. We will be working on the training materials, have discussions with the global Galaxy traning community. Do you teach with Galaxy? Want to learn how to add your tutorial to the GTN? New to the community and just want to learn more? Everybody is welcome!
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This past year has been a struggle for all of us, but one task has become apparent as one of the most time consuming portions of course preparation during a pandemic: Video Production.
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