Delphine Lariviere
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Tutorials
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Genome Annotation
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Essential genes detection with Transposon insertion sequencing
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Assembly
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Unicycler Assembly
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Assembly
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VGP assembly pipeline
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Assembly
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Making sense of a newly assembled genome
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Assembly
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VGP assembly pipeline - short version
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Using Galaxy and Managing your Data
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Use Jupyter notebooks in Galaxy
Slides
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Genome Annotation
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Essential genes detection with Transposon insertion sequencing
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Assembly
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Unicycler Assembly
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Assembly
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Deeper look into Genome Assembly algorithms
News
14 March 2022
We are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline (fig. 1) is now available in the Galaxy Training Network. The Vertebrate Genomes Project aims to generate high-quality, near-error-free, gap-free, chromosome-level, haplotype-phased, annotated reference genome assemblies for every vertebrate species.
Full Story
18 March 2021
Every 3 months we organise one day dedicated to the GTN community! Thursday, May 20th is the next GTN CoFest. We will be working on the training materials, have discussions with the global Galaxy traning community. Do you teach with Galaxy? Want to learn how to add your tutorial to the GTN? New to the community and just want to learn more? Everybody is welcome!
Full Story
16 March 2021
Authors: 
Helena Rasche
Delphine Lariviere
This past year has been a struggle for all of us, but one task has become apparent as one of the most time consuming portions of course preparation during a pandemic: Video Production.
Full Story
Cristóbal Gallardo
Alex OstrovskyWe are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline (fig. 1) is now available in the Galaxy Training Network. The Vertebrate Genomes Project aims to generate high-quality, near-error-free, gap-free, chromosome-level, haplotype-phased, annotated reference genome assemblies for every vertebrate species.
Full Story
Saskia Hiltemann
Bérénice Batut
Jennifer Hillman-Jackson
Anna Syme
Maria DoyleEvery 3 months we organise one day dedicated to the GTN community! Thursday, May 20th is the next GTN CoFest. We will be working on the training materials, have discussions with the global Galaxy traning community. Do you teach with Galaxy? Want to learn how to add your tutorial to the GTN? New to the community and just want to learn more? Everybody is welcome!
Full Story
Helena RascheDelphine Lariviere
This past year has been a struggle for all of us, but one task has become apparent as one of the most time consuming portions of course preparation during a pandemic: Video Production.
Full Story