Alex Ostrovsky
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Tutorials
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Assembly
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VGP assembly pipeline - short version
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Assembly
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VGP assembly pipeline
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Single Cell
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Downstream Single-cell RNA analysis with RaceID
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Development in Galaxy
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Creating Galaxy tools from Conda Through Deployment
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Variant Analysis
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Calling variants in non-diploid systems
Slides
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Single Cell
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Dealing with Cross-Contamination in Fixed Barcode Protocols
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Single Cell
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Plates, Batches, and Barcodes
News
14 March 2022
We are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline (fig. 1) is now available in the Galaxy Training Network. The Vertebrate Genomes Project aims to generate high-quality, near-error-free, gap-free, chromosome-level, haplotype-phased, annotated reference genome assemblies for every vertebrate species.
Full Story
Cristóbal Gallardo
Delphine Lariviere
Alex OstrovskyWe are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline (fig. 1) is now available in the Galaxy Training Network. The Vertebrate Genomes Project aims to generate high-quality, near-error-free, gap-free, chromosome-level, haplotype-phased, annotated reference genome assemblies for every vertebrate species.
Full Story