Natalie Whitaker-Allen

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Tutorials

• Microbiome / Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads 🧐
• Microbiome / Binning of metagenomic sequencing data 🧐
• Microbiome / Remove contamination and host reads 🧐
• Microbiome / Assembly of metagenomic sequencing data 🧐

Video Recordings

• Microbiome / Assembly of metagenomic sequencing data 💬
• Introduction to Galaxy Analyses / Galaxy Basics for genomics 💬 🗣
• Statistics and machine learning / GLEAM Image Learner - Validating Skin Lesion Classification on HAM10000 💬
• Statistics and machine learning / Gleam Multimodal Learner - Head and Neck cancer Recurrence Prediction with HANCOCK 💬

Events

• Galaxy Training Academy 2025 🎪 🧑‍🏫
• Galaxy Training Academy 2026 🎪 🧑‍🏫
• Galaxy Training Academy 2024 🎪 🧑‍🏫

GitHub Activity

github Issues Reported

6 Merged Pull Requests

See all of the github Pull Requests and github Commits by Natalie Whitaker-Allen.

• Add recording to GLEAM multimodal learner tutorial
  statistics
• Add recording to GLEAM image learner tutorial
  statistics
• Updating broken data link in "Getting your hands-on climate data" tutorial
  climate
• Adding Giuseppe Defazio to CONTRIBUTORS.yaml
  template-and-tools
• Adding Natalie WA to GTN contributors list
  template-and-tools

Reviewed 7 PRs

We love our community reviewing each other's work!

• [Google Form] New Recording Submission! Microbiome - Host Removal - Mina
  microbiome
  GTA
• [Google Form] New Recording Submission! Metagenome-Assembled Genomes (MAGs) - Bérénice
  microbiome
  GTA
• [Google Form] New Recording Submission! Metagenomic Assembly, Giuseppe
  microbiome
  GTA
• [Google Form] New Recording Submission! Metagenomics Binning by Paul Zierep
  microbiome
  GTA
• adding the link for the instructor google form
  template-and-tools

News

External Links

Favourite Topics

Favourite Formats