epigenetics

Tutorials covering epigenetics

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Epigenetics

Lesson Slides Hands-on Recordings Input dataset Workflows
ATAC-Seq data analysis
CUT&RUN data analysis
DNA Methylation data analysis
Formation of the Super-Structures on the Inactive X
ChIP-seq
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
ChIP-seq
Infinium Human Methylation BeadChip
Introduction to ChIP-Seq data analysis
Introduction to DNA Methylation data analysis

Single Cell

Lesson Slides Hands-on Recordings Input dataset Workflows
Pre-processing of 10X Single-Cell ATAC-seq Datasets
10x epigenetics
Single-cell ATAC-seq standard processing with SnapATAC2
10x epigenetics single-cell
Multi-sample batch correction with Harmony and SnapATAC2
10x epigenetics

Contributors

This material was contributed to by:

Torsten Houwaart avatar Torsten Houwaartorcid logoMo Heydarian avatar Mo HeydarianEkaterina Polkh avatar Ekaterina Polkhorcid logoTimon Schlegel avatar Timon Schlegelorcid logoMaria Doyle avatar Maria Doyleorcid logoFlorian Heyl avatar Florian Heylorcid logoDiana Chiang Jurado avatar Diana Chiang JuradoGildas Le Corguillé avatar Gildas Le Corguilléorcid logoSaskia Hiltemann avatar Saskia HiltemannJoachim Wolff avatar Joachim Wolfforcid logoBjörn Grüning avatar Björn Grüningorcid logoLucille Delisle avatar Lucille Delisleorcid logoMarisa Loach avatar Marisa Loachorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoHelena Rasche avatar Helena Rascheorcid logoKhaled Jum'ah avatar Khaled Jum'ahNiall Beard avatar Niall Beardorcid logoMartin Čech avatar Martin Čechorcid logoKrzysztof Poterlowicz avatar Krzysztof PoterlowiczLeily Rabbani avatar Leily Rabbaniorcid logoMallory Freeberg avatar Mallory Freebergorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoTristan Reynolds avatar Tristan ReynoldsDevon Ryan avatar Devon Ryanorcid logoBérénice Batut avatar Bérénice Batutorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoAnup Kumar avatar Anup Kumarorcid logoWendi Bacon avatar Wendi BaconVivek Bhardwaj avatar Vivek BhardwajMélanie Petera avatar Mélanie Peteraorcid logoKatarzyna Kamieniecka avatar Katarzyna KamienieckaFriederike Dündar avatar Friederike DündarMehmet Tekman avatar Mehmet TekmanVerena Moosmann avatar Verena MoosmannFidel Ramirez avatar Fidel RamirezWilliam Durand avatar William Durandorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAnika Erxleben avatar Anika Erxlebenorcid logoArmin Dadras avatar Armin Dadrasorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotz

Funding

These individuals or organisations provided funding support for the development of this resource

Logo
The University of Melbourne
Logo
ELIXIR Europe
Logo
de.KCD
Logo
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Logo
Australian BioCommons
Logo
Melbourne Bioinformatics
Logo
de.NBI
Logo
UFR
Logo
Collaborative Research Centre 992