epigenetics

Tutorials covering epigenetics

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Epigenetics

Lesson Slides Hands-on Recordings Input dataset Workflows
ATAC-Seq data analysis
CUT&RUN data analysis
DNA Methylation data analysis
Formation of the Super-Structures on the Inactive X
ChIP-seq
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
ChIP-seq
Infinium Human Methylation BeadChip
Introduction to ChIP-Seq data analysis
Introduction to DNA Methylation data analysis

Single Cell

Lesson Slides Hands-on Recordings Input dataset Workflows
Pre-processing of 10X Single-Cell ATAC-seq Datasets
10x epigenetics
Single-cell ATAC-seq standard processing with SnapATAC2
10x epigenetics single-cell
Multi-sample batch correction with Harmony and SnapATAC2
10x epigenetics

Contributors

This material was contributed to by:

orcid logoWendi Bacon avatar Wendi Baconorcid logoMarisa Loach avatar Marisa LoachTorsten Houwaart avatar Torsten Houwaartorcid logoHelena Rasche avatar Helena RascheVivek Bhardwaj avatar Vivek Bhardwajorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoMo Heydarian avatar Mo HeydarianEkaterina Polkh avatar Ekaterina Polkhorcid logoLucille Delisle avatar Lucille Delisleorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoSaskia Hiltemann avatar Saskia HiltemannFidel Ramirez avatar Fidel Ramirezorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoMallory Freeberg avatar Mallory Freebergorcid logoAnup Kumar avatar Anup KumarMélanie Petera avatar Mélanie PeteraFriederike Dündar avatar Friederike Dündarorcid logoArmin Dadras avatar Armin Dadrasorcid logoTimon Schlegel avatar Timon Schlegelorcid logoKrzysztof Poterlowicz avatar Krzysztof PoterlowiczMehmet Tekman avatar Mehmet Tekmanorcid logoMaria Doyle avatar Maria DoyleNiall Beard avatar Niall Beardorcid logoTristan Reynolds avatar Tristan ReynoldsGildas Le Corguillé avatar Gildas Le Corguilléorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBérénice Batut avatar Bérénice BatutLeily Rabbani avatar Leily Rabbaniorcid logoMartin Čech avatar Martin ČechVerena Moosmann avatar Verena MoosmannDevon Ryan avatar Devon Ryanorcid logoFlorian Heyl avatar Florian Heylorcid logoBjörn Grüning avatar Björn Grüningorcid logoAnika Erxleben avatar Anika ErxlebenWilliam Durand avatar William Durandorcid logoWolfgang Maier avatar Wolfgang MaierJoachim Wolff avatar Joachim Wolfforcid logoDiana Chiang Jurado avatar Diana Chiang Jurado

Funding

These individuals or organisations provided funding support for the development of this resource

Logo
The University of Melbourne
Logo
de.NBI
Logo
Australian BioCommons
Logo
de.KCD
Logo
UFR
Logo
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Logo
Melbourne Bioinformatics
Logo
Collaborative Research Centre 992
Logo
ELIXIR Europe