epigenetics

Tutorials covering epigenetics

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Epigenetics

Lesson Slides Hands-on Recordings Input dataset Workflows
ATAC-Seq data analysis
CUT&RUN data analysis
DNA Methylation data analysis
Formation of the Super-Structures on the Inactive X
ChIP-seq
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
ChIP-seq
Infinium Human Methylation BeadChip
Introduction to ChIP-Seq data analysis
Introduction to DNA Methylation data analysis

Single Cell

Lesson Slides Hands-on Recordings Input dataset Workflows
Pre-processing of 10X Single-Cell ATAC-seq Datasets
10x epigenetics
Single-cell ATAC-seq standard processing with SnapATAC2
10x epigenetics single-cell
Multi-sample batch correction with Harmony and SnapATAC2
10x epigenetics

Contributors

This material was contributed to by:

orcid logoAnika Erxleben avatar Anika ErxlebenWilliam Durand avatar William Durandorcid logoWendi Bacon avatar Wendi Baconorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoMo Heydarian avatar Mo Heydarianorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoMarisa Loach avatar Marisa Loachorcid logoMallory Freeberg avatar Mallory Freebergorcid logoFlorian Heyl avatar Florian Heylorcid logoLucille Delisle avatar Lucille Delisleorcid logoTristan Reynolds avatar Tristan ReynoldsFidel Ramirez avatar Fidel RamirezMehmet Tekman avatar Mehmet TekmanVerena Moosmann avatar Verena Moosmannorcid logoMaria Doyle avatar Maria DoyleEkaterina Polkh avatar Ekaterina Polkhorcid logoKrzysztof Poterlowicz avatar Krzysztof PoterlowiczDevon Ryan avatar Devon Ryanorcid logoMartin Čech avatar Martin ČechJoachim Wolff avatar Joachim Wolfforcid logoTimon Schlegel avatar Timon Schlegelorcid logoDiana Chiang Jurado avatar Diana Chiang Juradoorcid logoNicola Soranzo avatar Nicola SoranzoVivek Bhardwaj avatar Vivek Bhardwajorcid logoBjörn Grüning avatar Björn GrüningNiall Beard avatar Niall Beardorcid logoArmin Dadras avatar Armin DadrasLeily Rabbani avatar Leily Rabbaniorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoBérénice Batut avatar Bérénice BatutMélanie Petera avatar Mélanie PeteraFriederike Dündar avatar Friederike DündarGildas Le Corguillé avatar Gildas Le Corguilléorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAnup Kumar avatar Anup KumarTorsten Houwaart avatar Torsten Houwaartorcid logoHelena Rasche avatar Helena Rasche

Funding

These individuals or organisations provided funding support for the development of this resource

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UFR
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de.KCD
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Australian BioCommons
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de.NBI
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Collaborative Research Centre 992
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ELIXIR Europe
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Melbourne Bioinformatics
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EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
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The University of Melbourne