dev

Tutorials covering dev

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Development in Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Adding and updating best practice metadata for Galaxy tools using the bio.tools registry
Contributing a New Feature to Galaxy Core
Contributing to BioBlend as a developer
Creating Galaxy tools from Conda Through Deployment
Data source integration
Debugging Galaxy
Galaxy Code Architecture
Galaxy Interactive Tools
Galaxy Interactive Tours
Galaxy Webhooks
Generic plugins
JavaScript plugins
Prerequisites for building software/conda packages
Scripting Galaxy using the API and BioBlend
Setting up a dev Onedata instance
storage
Tool Dependencies and Conda
Tool Dependencies and Containers
Tool Shed: sharing Galaxy tools
Tool development and integration into Galaxy
ToolFactory: Generating Tools From More Complex Scripts
ToolFactory: Generating Tools From Simple Scripts
Writing Automated Tests for Galaxy

Contributors

This material was contributed to by:

Simon Bray avatar Simon Brayorcid logoBérénice Batut avatar Bérénice Batutorcid logoCristóbal Gallardo avatar Cristóbal GallardoMatthias Bernt avatar Matthias BerntDave B. avatar Dave B.Youri Hoogstrate avatar Youri HoogstrateRoss Lazarus avatar Ross LazarusEstelle Ancelet avatar Estelle AnceletErik Schill avatar Erik Schillorcid logoSaskia Hiltemann avatar Saskia HiltemannNitesh Turaga avatar Nitesh Turagaorcid logoWendi Bacon avatar Wendi BaconCyril Monjeaud avatar Cyril Monjeaudorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoNate Coraor avatar Nate CoraorHervé Ménager avatar Hervé MénagerDannon Baker avatar Dannon Bakerorcid logoJohn Chilton avatar John Chiltonorcid logoYvan Le Bras avatar Yvan Le BrasAssunta DeSanto avatar Assunta DeSantoStéphanie Legras avatar Stéphanie Legrasorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoMartin Čech avatar Martin Čechorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoJohan Gustafsson avatar Johan GustafssonGildas Le Corguillé avatar Gildas Le Corguilléorcid logoŁukasz Opioła avatar Łukasz Opiołaorcid logoBjörn Grüning avatar Björn Grüningorcid logoCameron Hyde avatar Cameron Hydeorcid logoArmin Dadras avatar Armin DadrasMarie Josse avatar Marie Josseorcid logoJohn Davis avatar John Davisorcid logoGianmauro Cuccuru avatar Gianmauro Cuccuruorcid logoPaul Zierep avatar Paul ZierepNiall Beard avatar Niall Beardorcid logoClemens Blank avatar Clemens BlankClare Sloggett avatar Clare SloggettAysam Guerler avatar Aysam GuerlerLoraine Guéguen avatar Loraine GuéguenLain Pavot avatar Lain PavotWilliam Durand avatar William Durandorcid logoHelena Rasche avatar Helena Rasche

Funding

These individuals or organisations provided funding support for the development of this resource

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UFR
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EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
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ELIXIR Europe
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de.NBI