cyoa
Tutorials covering cyoa
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Foundations of Data Science
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics | |||||
| Data visualisation Olympics - Visualization in R | |||||
| Data Manipulation Olympics - SQL | |||||
| Data Manipulation Olympics - JQ |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Refining Genome Annotations with Apollo (eukaryotes) |
Introduction to Galaxy Analyses
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics |
Microbiome
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition |
Teaching and Hosting Galaxy training
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Course Builder | |||||
| Training Infrastructure as a Service |
Transcriptomics
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathway analysis with the MINERVA Platform | |||||
| Reference-based RNA-Seq data analysis |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Trio Analysis using Synthetic Datasets from RD-Connect GPAP |
Contributors
This material was contributed to by:
Mehmet Tekman
Niall Beard
Donny Vrins
Saskia Hiltemann
Clea Siguret
Cristóbal Gallardo
Mallory Freeberg
Linelle Abueg
Mira Kuntz
Anika Erxleben
Ekaterina Polkh
Bérénice Batut
Iacopo Cristoferi
Myrthe van Baardwijk
Mo Heydarian
Wolfgang Maier
Simon Bray
Marek Ostaszewski
Marius van den Beek
Hans-Rudolf Hotz
Amirhossein Naghsh Nilchi
Scott Cain
Yongbin Li
William Durand
Daniela Schneider
Nicola Soranzo
Matti Hoch
Paul Zierep
Helena Rasche
Armin Dadras
José Manuel Domínguez
Peter van Heusden
Graeme Tyson
Maria Doyle
Björn Grüning
Martin Čech
Clemens Blank
Pavankumar Videm
Anthony Bretaudeau
Deepti Varshney
Sanjay Kumar Srikakulam
Lucille Delisle
Jasper Ouwerkerk
Engy Nasr
Funding
These individuals or organisations provided funding support for the development of this resource
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
de.NBI
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
EOSC-Life
EOSC-Life has received funding from the European Union’s Horizon 2020 programme under grant agreement number 824087
BeYond-COVID
BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response.
This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID)