cyoa
Tutorials covering cyoa
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Foundations of Data Science
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics | |||||
| Data visualisation Olympics - Visualization in R | |||||
| Data Manipulation Olympics - SQL | |||||
| Data Manipulation Olympics - JQ |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Refining Genome Annotations with Apollo (eukaryotes) |
Introduction to Galaxy Analyses
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics |
Microbiome
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition |
Teaching and Hosting Galaxy training
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Course Builder | |||||
| Training Infrastructure as a Service |
Transcriptomics
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathway analysis with the MINERVA Platform | |||||
| Reference-based RNA-Seq data analysis |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Trio Analysis using Synthetic Datasets from RD-Connect GPAP |
Contributors
This material was contributed to by:
Graeme Tyson
Marius van den Beek
Yongbin Li
William Durand
Peter van Heusden
Amirhossein Naghsh Nilchi
Simon Bray
Bérénice Batut
Daniela Schneider
Donny Vrins
Paul Zierep
Iacopo Cristoferi
Clemens Blank
Sanjay Kumar Srikakulam
Wolfgang Maier
Myrthe van Baardwijk
Cristóbal Gallardo
Saskia Hiltemann
Martin Čech
José Manuel Domínguez
Lucille Delisle
Mehmet Tekman
Scott Cain
Ekaterina Polkh
Engy Nasr
Linelle Abueg
Jasper Ouwerkerk
Mira Kuntz
Helena Rasche
Mallory Freeberg
Nicola Soranzo
Anika Erxleben
Anthony Bretaudeau
Hans-Rudolf Hotz
Maria Doyle
Björn Grüning
Marek Ostaszewski
Mo Heydarian
Niall Beard
Armin Dadras
Deepti Varshney
Clea Siguret
Matti Hoch
Pavankumar Videm
Funding
These individuals or organisations provided funding support for the development of this resource
de.NBI
BeYond-COVID
BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response.
This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID)
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
EOSC-Life
EOSC-Life has received funding from the European Union’s Horizon 2020 programme under grant agreement number 824087
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.