Using Galaxy and Managing your Data
A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.
Material
Uploading Data
These tutorials will help you get data into Galaxy, before you analyse it.Lesson | Slides | Hands-on | Galaxy instances |
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Getting data into Galaxy
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Rule Based Uploader
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Rule Based Uploader: Advanced
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Galaxy Features
Learn how to use Galaxy efficientlyLesson | Slides | Hands-on | Galaxy instances |
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Extracting Workflows from Histories
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Searching Your History
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Understanding Galaxy history system
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Making Data Manageable
Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.Lesson | Slides | Hands-on | Galaxy instances |
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Group tags for complex experimental designs
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Multisample Analysis
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Name tags for following complex histories
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Using dataset collections
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Analysing Data
Some advanced topics in data analyis.Lesson | Slides | Hands-on | Galaxy instances |
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Creating, Editing and Importing Galaxy Workflows
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InterMine integration with Galaxy
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JupyterLab in Galaxy
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RStudio in Galaxy
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Use Jupyter notebooks in Galaxy
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Using Workflow Parameters
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Download and Export
Once you are done with your analyses in Galaxy, it's time to download your data and free up space.Lesson | Slides | Hands-on | Galaxy instances |
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Downloading and Deleting Data in Galaxy
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Other
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Assorted other tutorials
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Maintainers
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Contributors
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