User Interface and Data Manipulation
A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.
Material
Uploading Data
These tutorials will help you get data into Galaxy, before you analyse it.| Lesson | Slides | Hands-on | Galaxy instances |
|---|---|---|---|
|
Getting data into Galaxy
|
slides | ||
|
Rule Based Uploader
level level level
|
tutorial Toggle Dropdown | ||
|
Rule Based Uploader: Advanced
level level level
|
tutorial Toggle Dropdown |
Galaxy Interface
These tutorials will cover the UI and important features| Lesson | Slides | Hands-on | Galaxy instances |
|---|---|---|---|
|
Extracting Workflows from Histories
|
tutorial Toggle Dropdown | ||
|
Searching Your History
level level level
|
tutorial Toggle Dropdown | ||
|
Understanding Galaxy history system
|
tutorial Toggle Dropdown |
Making Data Manageable
Now that you have data in Galaxy, let's make it easier to work with through Collections and structured data.| Lesson | Slides | Hands-on | Galaxy instances |
|---|---|---|---|
|
Group tags for complex experimental designs
|
tutorial Toggle Dropdown | ||
|
Multisample Analysis
level level level
|
tutorial Toggle Dropdown | ||
|
Name tags for following complex histories
|
tutorial Toggle Dropdown | ||
|
Using dataset collection
level level level
|
tutorial Toggle Dropdown |
Analysing Data
Some advanced topics in data analyis.| Lesson | Slides | Hands-on | Galaxy instances |
|---|---|---|---|
|
Creating, Editing and Importing Galaxy Workflows
level level level
|
tutorial Toggle Dropdown | instances | |
|
JupyterLab in Galaxy
|
tutorial Toggle Dropdown | ||
|
RStudio in Galaxy
|
tutorial Toggle Dropdown | ||
|
Use Jupyter notebooks in Galaxy
|
tutorial Toggle Dropdown | ||
|
Using Workflow Parameters
level level level
|
tutorial Toggle Dropdown | instances |
Download and Export
Once you are done with your analyses in Galaxy, it's time to download your data and free up space.| Lesson | Slides | Hands-on | Galaxy instances |
|---|---|---|---|
|
Downloading and Deleting Data in Galaxy
level level level
|
tutorial Toggle Dropdown |
Other
search
galaxy-cross
Assorted other tutorials
| Lesson | Slides | Hands-on | Galaxy instances |
|---|
Maintainers
This material is maintained by:
Jennifer Hillman-Jackson, 
Helena Rasche
For any question related to this topic and the content, you can contact them or visit our Gitter channel.
Contributors
This material was contributed to by:
Marius van den Beek, 
Simon Gladman, Helena Rasche, 
Dave Clements, 
Anne Pajon, 
Maria Doyle, 
Saskia Hiltemann, 
Anne Fouilloux, 
Anton Nekrutenko, 
Bérénice Batut, 
Fotis E. Psomopoulos, 
Toby Hodges, 
John Chilton, 
Martin Čech, 
Delphine Lariviere