jbrowse1
Tutorials covering jbrowse1
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Chloroplast genome assembly | |||||
| Making sense of a newly assembled genome |
Genome Annotation
Sequence Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse |
Contributors
This material was contributed to by:
Bazante Sanders
Anthony Bretaudeau
Katherine Cox
Teresa Müller
Mateo Boudet
Nicola Soranzo
Delphine Lariviere
Laura Leroi
Gildas Le Corguillé
Anna Syme
Alexandre Cormier
Jonathan Kreplak
Simon Bray
Candace Savonen
Tristan Reynolds
Cristóbal Gallardo
Ava Hoffman
Niall Beard
Elizabeth Humphries
Simon Gladman
Robert Meller
Torsten Seemann
Erwan Corre
Helena Rasche
Jennifer Hillman-Jackson
Natalie Kucher
Deepti Varshney
Frederick Tan
Jasper Ouwerkerk
Nathan Dunn
Romane LIBOUBAN
Peter van Heusden
Felicitas Kindel
Maria Doyle
Bérénice Batut
Paul Zierep
Anton Nekrutenko
Miaomiao Zhou
Saskia Hiltemann
Björn Grüning
Stéphanie Robin
Funding
These individuals or organisations provided funding support for the development of this resource
Australian BioCommons
NHGRI GDS Community Network
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
The University of Melbourne
NHGRI ANVIL
ELIXIR Europe
ABRomics
Melbourne Bioinformatics
IFB
Avans