cyoa
Tutorials covering cyoa
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Foundations of Data Science
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics | |||||
| Data visualisation Olympics - Visualization in R | |||||
| Data Manipulation Olympics - SQL | |||||
| Data Manipulation Olympics - JQ |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Refining Genome Annotations with Apollo (eukaryotes) |
Introduction to Galaxy Analyses
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Data Manipulation Olympics |
Microbiome
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition |
Teaching and Hosting Galaxy training
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Course Builder | |||||
| Training Infrastructure as a Service |
Transcriptomics
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Pathway analysis with the MINERVA Platform | |||||
| Reference-based RNA-Seq data analysis |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Trio Analysis using Synthetic Datasets from RD-Connect GPAP |
Contributors
This material was contributed to by:
Florian Heyl
Bérénice Batut
Graeme Tyson
Marius van den Beek
Jasper Ouwerkerk
Myrthe van Baardwijk
Paul Zierep
Marek Ostaszewski
Maria Doyle
Scott Cain
Niall Beard
Peter van Heusden
Mira Kuntz
Clea Siguret
Anika Erxleben
Mo Heydarian
Björn Grüning
Saskia Hiltemann
Daniela Schneider
Lucille Delisle
Hans-Rudolf Hotz
Nicola Soranzo
Pavankumar Videm
Cristóbal Gallardo
Martin Čech
Donny Vrins
Anthony Bretaudeau
Matti Hoch
Clemens Blank
Deepti Varshney
Helena Rasche
Engy Nasr
Yongbin Li
Iacopo Cristoferi
Mehmet Tekman
Wolfgang Maier
Amirhossein Naghsh Nilchi
Mallory Freeberg
William Durand
Simon Bray
José Manuel Domínguez
Sanjay Kumar Srikakulam
Ekaterina Polkh
Armin Dadras
Linelle Abueg
Funding
These individuals or organisations provided funding support for the development of this resource
de.NBI
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
EOSC-Life
EOSC-Life has received funding from the European Union’s Horizon 2020 programme under grant agreement number 824087
BeYond-COVID
BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response.
This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID)