sequence-analysis

Tutorials covering sequence-analysis

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Sequence analysis

Lesson Slides Hands-on Recordings Input dataset Workflows
Clean and manage Sanger sequences from raw files to aligned consensus
Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants
plants
Mapping
deutsch español italiano
NCBI BLAST+ against the MAdLand
plants
Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes
virology
Quality Control
deutsch español italiano
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
illumina bacteria microgalaxy
Removal of human reads from SARS-CoV-2 sequencing data
covid19
SARS-CoV-2 Viral Sample Alignment and Variant Visualization
covid19 gmod jbrowse1
Screening assembled genomes for contamination using NCBI FCS

Contributors

This material was contributed to by:

orcid logoClea Siguret avatar Clea Siguretorcid logoCameron Hyde avatar Cameron Hydeorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoNicola Soranzo avatar Nicola SoranzoRobert Meller avatar Robert Mellerorcid logoAnup Kumar avatar Anup Kumarorcid logoBjörn Grüning avatar Björn Grüningorcid logoAnika Erxleben avatar Anika Erxlebenorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoBérénice Batut avatar Bérénice Batutorcid logoMateo Boudet avatar Mateo Boudetorcid logoStéphanie Robin avatar Stéphanie RobinSwathi Nataraj avatar Swathi Natarajorcid logoTristan Reynolds avatar Tristan ReynoldsNatalie Kucher avatar Natalie KucherMehmet Tekman avatar Mehmet TekmanNiall Beard avatar Niall Beardorcid logoErwan Corre avatar Erwan CorreKatherine Cox avatar Katherine Coxorcid logoColine Royaux avatar Coline Royauxorcid logoTeresa Müller avatar Teresa MüllerJoachim Wolff avatar Joachim Wolfforcid logoAlexandre Cormier avatar Alexandre CormierVerena Moosmann avatar Verena Moosmannorcid logoLaura Leroi avatar Laura Leroiorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoAnne Fouilloux avatar Anne FouillouxWilliam Durand avatar William DurandAva Hoffman avatar Ava HoffmanEric Tvedte avatar Eric TvedteElizabeth Humphries avatar Elizabeth HumphriesFrederick Tan avatar Frederick Tanorcid logoHelena Rasche avatar Helena RascheSimon Bray avatar Simon Brayorcid logoCristóbal Gallardo avatar Cristóbal GallardoEkaterina Polkh avatar Ekaterina PolkhCandace Savonen avatar Candace Savonenorcid logoMaria Doyle avatar Maria Doyleorcid logoSaskia Hiltemann avatar Saskia HiltemannMatthias Bernt avatar Matthias BerntElischa Berger avatar Elischa Berger

Funding

These individuals or organisations provided funding support for the development of this resource

Logo
Melbourne Bioinformatics
Logo
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Logo
Australian BioCommons
Logo
NHGRI ANVIL
Logo
NIH
Logo
ABRomics
Logo
MAdLand
Logo
BeYond-COVID
BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response. This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID)
Logo
The University of Melbourne
Logo
DataPLANT
Logo
NHGRI GDS Community Network