sequence-analysis

Tutorials covering sequence-analysis

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Sequence analysis

Lesson Slides Hands-on Recordings Input dataset Workflows
Clean and manage Sanger sequences from raw files to aligned consensus
Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants
plants
Mapping
deutsch español italiano
NCBI BLAST+ against the MAdLand
plants
Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes
virology
Quality Control
deutsch español italiano
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
illumina bacteria microgalaxy
Removal of human reads from SARS-CoV-2 sequencing data
covid19
SARS-CoV-2 Viral Sample Alignment and Variant Visualization
covid19 gmod jbrowse1
Screening assembled genomes for contamination using NCBI FCS

Contributors

This material was contributed to by:

orcid logoAnup Kumar avatar Anup Kumarorcid logoClea Siguret avatar Clea Siguretorcid logoCameron Hyde avatar Cameron Hydeorcid logoTeresa Müller avatar Teresa Müllerorcid logoBérénice Batut avatar Bérénice Batutorcid logoMateo Boudet avatar Mateo Boudetorcid logoColine Royaux avatar Coline RoyauxNiall Beard avatar Niall Beardorcid logoBjörn Grüning avatar Björn GrüningElischa Berger avatar Elischa Bergerorcid logoDeepti Varshney avatar Deepti VarshneyRobert Meller avatar Robert Mellerorcid logoTristan Reynolds avatar Tristan ReynoldsSwathi Nataraj avatar Swathi NatarajNatalie Kucher avatar Natalie Kucherorcid logoMaria Doyle avatar Maria Doyleorcid logoHelena Rasche avatar Helena RascheWilliam Durand avatar William Durandorcid logoAnthony Bretaudeau avatar Anthony BretaudeauJoachim Wolff avatar Joachim Wolfforcid logoNicola Soranzo avatar Nicola Soranzoorcid logoErwan Corre avatar Erwan CorreAva Hoffman avatar Ava HoffmanFrederick Tan avatar Frederick TanEkaterina Polkh avatar Ekaterina PolkhCandace Savonen avatar Candace Savonenorcid logoAlexandre Cormier avatar Alexandre Cormierorcid logoAnne Fouilloux avatar Anne FouillouxSimon Bray avatar Simon BrayVerena Moosmann avatar Verena MoosmannEric Tvedte avatar Eric Tvedteorcid logoWolfgang Maier avatar Wolfgang MaierElizabeth Humphries avatar Elizabeth HumphriesMehmet Tekman avatar Mehmet Tekmanorcid logoStéphanie Robin avatar Stéphanie Robinorcid logoAnika Erxleben avatar Anika Erxlebenorcid logoCristóbal Gallardo avatar Cristóbal GallardoMatthias Bernt avatar Matthias Berntorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoLaura Leroi avatar Laura LeroiKatherine Cox avatar Katherine Cox

Funding

These individuals or organisations provided funding support for the development of this resource

Logo
Melbourne Bioinformatics
Logo
ABRomics
Logo
MAdLand
Logo
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Logo
BeYond-COVID
BY-COVID is an EC funded project that tackles the data challenges that can hinder effective pandemic response. This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement № 101046203 (BY-COVID)
Logo
NHGRI ANVIL
Logo
Australian BioCommons
Logo
DataPLANT
Logo
NIH
Logo
NHGRI GDS Community Network
Logo
The University of Melbourne