gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Jennifer Hillman-Jackson
Saskia Hiltemann
Simon Bray
Alexandre Cormier
Erwan Corre
Bazante Sanders
Anton Nekrutenko
Elizabeth Humphries
Simon Gladman
Laura Leroi
Niall Beard
Mateo Boudet
Bérénice Batut
Candace Savonen
Anna Syme
Helena Rasche
Anthony Bretaudeau
Romane LIBOUBAN
Jasper Ouwerkerk
Stéphanie Robin
Robert Meller
Yo Yehudi
Björn Grüning
Frederick Tan
Cristóbal Gallardo
Katherine Cox
Nicola Soranzo
Jonathan Kreplak
Delphine Lariviere
Torsten Seemann
Deepti Varshney
Paul Zierep
Peter van Heusden
Maria Doyle
Teresa Müller
Tristan Reynolds
Miaomiao Zhou
Nathan Dunn
Ava Hoffman
Natalie Kucher
Daniela Butano
Funding
These individuals or organisations provided funding support for the development of this resource
Avans
Australian BioCommons
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Melbourne Bioinformatics
IFB
NHGRI GDS Community Network
ABRomics
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
NHGRI ANVIL
ELIXIR Europe
The University of Melbourne