gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Stéphanie Robin
Paul Zierep
Simon Gladman
Torsten Seemann
Bérénice Batut
Laura Leroi
Tristan Reynolds
Maria Doyle
Daniela Butano
Elizabeth Humphries
Yo Yehudi
Robert Meller
Helena Rasche
Anna Syme
Candace Savonen
Simon Bray
Björn Grüning
Nicola Soranzo
Jasper Ouwerkerk
Miaomiao Zhou
Saskia Hiltemann
Ava Hoffman
Natalie Kucher
Jennifer Hillman-Jackson
Erwan Corre
Deepti Varshney
Delphine Lariviere
Anton Nekrutenko
Cristóbal Gallardo
Jonathan Kreplak
Teresa Müller
Peter van Heusden
Niall Beard
Mateo Boudet
Romane LIBOUBAN
Alexandre Cormier
Frederick Tan
Katherine Cox
Anthony Bretaudeau
Nathan Dunn
Bazante Sanders
Funding
These individuals or organisations provided funding support for the development of this resource
NHGRI GDS Community Network
IFB
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Melbourne Bioinformatics
Australian BioCommons
Avans
The University of Melbourne
ELIXIR Europe
ABRomics
NHGRI ANVIL
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.