gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Anthony Bretaudeau
Tristan Reynolds
Björn Grüning
Delphine Lariviere
Nicola Soranzo
Jonathan Kreplak
Erwan Corre
Katherine Cox
Daniela Butano
Ava Hoffman
Alexandre Cormier
Torsten Seemann
Romane LIBOUBAN
Helena Rasche
Nathan Dunn
Anna Syme
Maria Doyle
Candace Savonen
Frederick Tan
Laura Leroi
Jasper Ouwerkerk
Jennifer Hillman-Jackson
Stéphanie Robin
Cristóbal Gallardo
Simon Bray
Robert Meller
Saskia Hiltemann
Yo Yehudi
Anton Nekrutenko
Deepti Varshney
Bazante Sanders
Mateo Boudet
Natalie Kucher
Elizabeth Humphries
Miaomiao Zhou
Paul Zierep
Niall Beard
Teresa Müller
Peter van Heusden
Bérénice Batut
Simon Gladman
Funding
These individuals or organisations provided funding support for the development of this resource
The University of Melbourne
Avans
Australian BioCommons
NHGRI GDS Community Network
IFB
ABRomics
ELIXIR Europe
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Melbourne Bioinformatics
NHGRI ANVIL
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.