gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Mateo Boudet
Erwan Corre
Anton Nekrutenko
Nathan Dunn
Saskia Hiltemann
Candace Savonen
Cristóbal Gallardo
Yo Yehudi
Bérénice Batut
Miaomiao Zhou
Simon Gladman
Ava Hoffman
Elizabeth Humphries
Delphine Lariviere
Tristan Reynolds
Teresa Müller
Alexandre Cormier
Deepti Varshney
Paul Zierep
Katherine Cox
Robert Meller
Anna Syme
Maria Doyle
Simon Bray
Niall Beard
Bazante Sanders
Nicola Soranzo
Daniela Butano
Anthony Bretaudeau
Jonathan Kreplak
Helena Rasche
Romane LIBOUBAN
Laura Leroi
Jasper Ouwerkerk
Peter van Heusden
Jennifer Hillman-Jackson
Natalie Kucher
Frederick Tan
Stéphanie Robin
Torsten Seemann
Björn Grüning
Funding
These individuals or organisations provided funding support for the development of this resource
The University of Melbourne
IFB
Melbourne Bioinformatics
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Avans
NHGRI GDS Community Network
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
NHGRI ANVIL
ELIXIR Europe
Australian BioCommons
ABRomics