gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Erwan Corre
Jonathan Kreplak
Mateo Boudet
Natalie Kucher
Torsten Seemann
Ava Hoffman
Peter van Heusden
Robert Meller
Miaomiao Zhou
Nicola Soranzo
Niall Beard
Simon Gladman
Deepti Varshney
Laura Leroi
Delphine Lariviere
Elizabeth Humphries
Maria Doyle
Tristan Reynolds
Stéphanie Robin
Katherine Cox
Bérénice Batut
Björn Grüning
Paul Zierep
Candace Savonen
Daniela Butano
Jennifer Hillman-Jackson
Romane LIBOUBAN
Alexandre Cormier
Jasper Ouwerkerk
Bazante Sanders
Frederick Tan
Saskia Hiltemann
Anthony Bretaudeau
Anton Nekrutenko
Helena Rasche
Nathan Dunn
Anna Syme
Teresa Müller
Yo Yehudi
Cristóbal Gallardo
Simon Bray
Funding
These individuals or organisations provided funding support for the development of this resource
IFB
The University of Melbourne
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
ELIXIR Europe
Melbourne Bioinformatics
NHGRI ANVIL
NHGRI GDS Community Network
Australian BioCommons
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
ABRomics
Avans