gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Peter van Heusden
Alexandre Cormier
Jasper Ouwerkerk
Anna Syme
Romane LIBOUBAN
Maria Doyle
Stéphanie Robin
Ava Hoffman
Jonathan Kreplak
Björn Grüning
Paul Zierep
Saskia Hiltemann
Robert Meller
Miaomiao Zhou
Bérénice Batut
Daniela Butano
Simon Gladman
Erwan Corre
Natalie Kucher
Laura Leroi
Katherine Cox
Torsten Seemann
Mateo Boudet
Anton Nekrutenko
Cristóbal Gallardo
Frederick Tan
Simon Bray
Nathan Dunn
Teresa Müller
Deepti Varshney
Anthony Bretaudeau
Delphine Lariviere
Nicola Soranzo
Tristan Reynolds
Yo Yehudi
Niall Beard
Helena Rasche
Candace Savonen
Elizabeth Humphries
Bazante Sanders
Jennifer Hillman-Jackson
Funding
These individuals or organisations provided funding support for the development of this resource
NHGRI GDS Community Network
IFB
ABRomics
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
The University of Melbourne
Avans
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
ELIXIR Europe
Australian BioCommons
Melbourne Bioinformatics
NHGRI ANVIL