gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Simon Gladman
Romane LIBOUBAN
Delphine Lariviere
Elizabeth Humphries
Tristan Reynolds
Yo Yehudi
Alexandre Cormier
Peter van Heusden
Anton Nekrutenko
Deepti Varshney
Anna Syme
Jonathan Kreplak
Bazante Sanders
Helena Rasche
Jennifer Hillman-Jackson
Erwan Corre
Ava Hoffman
Saskia Hiltemann
Robert Meller
Torsten Seemann
Laura Leroi
Bérénice Batut
Björn Grüning
Paul Zierep
Simon Bray
Jasper Ouwerkerk
Stéphanie Robin
Miaomiao Zhou
Teresa Müller
Natalie Kucher
Anthony Bretaudeau
Frederick Tan
Nicola Soranzo
Maria Doyle
Daniela Butano
Katherine Cox
Nathan Dunn
Niall Beard
Candace Savonen
Mateo Boudet
Cristóbal Gallardo
Funding
These individuals or organisations provided funding support for the development of this resource
NHGRI GDS Community Network
NHGRI ANVIL
ELIXIR Europe
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Australian BioCommons
Avans
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
ABRomics
Melbourne Bioinformatics
IFB
The University of Melbourne