gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Teresa Müller
Robert Meller
Elizabeth Humphries
Romane LIBOUBAN
Daniela Butano
Helena Rasche
Stéphanie Robin
Paul Zierep
Frederick Tan
Yo Yehudi
Katherine Cox
Bérénice Batut
Delphine Lariviere
Natalie Kucher
Candace Savonen
Alexandre Cormier
Tristan Reynolds
Cristóbal Gallardo
Simon Bray
Deepti Varshney
Nathan Dunn
Anthony Bretaudeau
Anna Syme
Anton Nekrutenko
Jasper Ouwerkerk
Miaomiao Zhou
Mateo Boudet
Jonathan Kreplak
Bazante Sanders
Ava Hoffman
Torsten Seemann
Peter van Heusden
Björn Grüning
Laura Leroi
Simon Gladman
Niall Beard
Maria Doyle
Jennifer Hillman-Jackson
Nicola Soranzo
Saskia Hiltemann
Erwan Corre
Funding
These individuals or organisations provided funding support for the development of this resource
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
NHGRI GDS Community Network
Avans
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
IFB
ELIXIR Europe
NHGRI ANVIL
ABRomics
The University of Melbourne
Melbourne Bioinformatics
Australian BioCommons