gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Alexandre Cormier
Katherine Cox
Björn Grüning
Robert Meller
Niall Beard
Natalie Kucher
Torsten Seemann
Mateo Boudet
Jennifer Hillman-Jackson
Nathan Dunn
Stéphanie Robin
Romane LIBOUBAN
Yo Yehudi
Miaomiao Zhou
Simon Bray
Saskia Hiltemann
Ava Hoffman
Anna Syme
Erwan Corre
Jasper Ouwerkerk
Anthony Bretaudeau
Daniela Butano
Bérénice Batut
Jonathan Kreplak
Laura Leroi
Helena Rasche
Peter van Heusden
Elizabeth Humphries
Simon Gladman
Nicola Soranzo
Maria Doyle
Delphine Lariviere
Deepti Varshney
Paul Zierep
Anton Nekrutenko
Teresa Müller
Candace Savonen
Bazante Sanders
Frederick Tan
Cristóbal Gallardo
Tristan Reynolds
Funding
These individuals or organisations provided funding support for the development of this resource
IFB
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
ELIXIR Europe
The University of Melbourne
NHGRI GDS Community Network
NHGRI ANVIL
Australian BioCommons
ABRomics
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
Melbourne Bioinformatics
Avans