gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Simon Gladman
Robert Meller
Romane LIBOUBAN
Bérénice Batut
Paul Zierep
Jonathan Kreplak
Saskia Hiltemann
Torsten Seemann
Anton Nekrutenko
Yo Yehudi
Candace Savonen
Peter van Heusden
Teresa Müller
Natalie Kucher
Cristóbal Gallardo
Erwan Corre
Miaomiao Zhou
Elizabeth Humphries
Niall Beard
Simon Bray
Jasper Ouwerkerk
Katherine Cox
Nathan Dunn
Bazante Sanders
Tristan Reynolds
Maria Doyle
Nicola Soranzo
Stéphanie Robin
Björn Grüning
Alexandre Cormier
Jennifer Hillman-Jackson
Mateo Boudet
Deepti Varshney
Frederick Tan
Anna Syme
Laura Leroi
Helena Rasche
Daniela Butano
Anthony Bretaudeau
Delphine Lariviere
Ava Hoffman
Funding
These individuals or organisations provided funding support for the development of this resource
NHGRI GDS Community Network
NHGRI ANVIL
Melbourne Bioinformatics
Avans
ABRomics
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
IFB
The University of Melbourne
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Australian BioCommons
ELIXIR Europe