gmod
Tutorials covering gmod
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Making sense of a newly assembled genome |
Using Galaxy and Managing your Data
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| InterMine integration with Galaxy |
Genome Annotation
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| SARS-CoV-2 Viral Sample Alignment and Variant Visualization |
Variant Analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Microbial Variant Calling |
Visualisation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genomic Data Visualisation with JBrowse | |||||
| Genomic Data Visualisation with JBrowse2 |
Contributors
This material was contributed to by:
Niall Beard
Peter van Heusden
Yo Yehudi
Daniela Butano
Simon Bray
Stéphanie Robin
Teresa Müller
Jasper Ouwerkerk
Paul Zierep
Candace Savonen
Cristóbal Gallardo
Saskia Hiltemann
Deepti Varshney
Robert Meller
Katherine Cox
Ava Hoffman
Torsten Seemann
Nicola Soranzo
Jonathan Kreplak
Romane LIBOUBAN
Erwan Corre
Miaomiao Zhou
Anthony Bretaudeau
Anton Nekrutenko
Bérénice Batut
Maria Doyle
Simon Gladman
Bazante Sanders
Mateo Boudet
Laura Leroi
Natalie Kucher
Alexandre Cormier
Nathan Dunn
Tristan Reynolds
Elizabeth Humphries
Anna Syme
Frederick Tan
Björn Grüning
Jennifer Hillman-Jackson
Delphine Lariviere
Helena Rasche
Funding
These individuals or organisations provided funding support for the development of this resource
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Avans
IFB
EuroScienceGateway
EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.
ELIXIR Europe
NHGRI ANVIL
The University of Melbourne
ABRomics
Melbourne Bioinformatics
NHGRI GDS Community Network
Australian BioCommons