2026-10-05T07:07:08+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is designed for beginners; no prior programming skills are required.
Published: 2026-10-05T07:07:08+00:00
Tags:
event, introduction, sequence-analysis, epigenetics, transcriptomics, variant-analysis, microbiome, contributions:organisers:teresa-m, contributions:organisers:Sch-Da, contributions:instructors:dianichj, contributions:instructors:Nilchia, contributions:instructors:wm75, contributions:instructors:paulzierep, contributions:funding:deNBI, contributions:funding:mwk, contributions:funding:nfdi4plants
What is Dataverse?
Published: 2026-06-25T09:16:34+00:00
Tags:
introduction, contributions:authorship:anuprulez, contributions:authorship:dadrasarmin, contributions:editing:Sch-Da, contributions:funding:ai4social, contributions:funding:eu, contributions:reviewing:Sch-Da, contributions:reviewing:dadrasarmin, contributions:reviewing:anuprulez, contributions:reviewing:shiltemann, contributions:reviewing:bgruening
Encontramos un artículo (Li et al. 2012) titulado “The histone acetyltransferase MOF is a key regulator of the embryonic stem cell core transcriptional network“. El artículo contiene el análisis de posibles genes (llamémoslos “diana”) asociados a la proteína llamada Mof. La asociación se obtuvo mediante ChIP-seq en ratones y los datos en bruto están disponibles en GEO. Sin embargo, la lista de genes no está en el material suplementar del artículo, ni forma parte de los datos enviados a GEO. Lo más parecido que hemos podido encontrar es un archivo en [GEO](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37268 que contiene una lista de las regiones en las que la señal está significativamente más alta (los llamados picos)
Published: 2026-03-30T10:09:15+00:00
Tags:
introduction, deutsch, español, italiano, contributions:authorship:pajanne, contributions:authorship:blankclemens, contributions:authorship:bebatut, contributions:authorship:bgruening, contributions:authorship:nsoranzo, contributions:authorship:dyusuf, contributions:authorship:sarah-peter, contributions:authorship:hexylena, contributions:editing:teresa-m, contributions:editing:dadrasarmin, contributions:translation:hvelab, contributions:translation:unode, contributions:funding:elixir-europe, contributions:funding:deNBI, contributions:funding:uni-freiburg, contributions:funding:biont, contributions:reviewing:shiltemann
Ci siamo imbattuti in un articolo (Li et al. 2012) intitolato “L’istone
Published: 2026-03-30T10:08:28+00:00
Tags:
introduction, deutsch, español, italiano, contributions:authorship:pajanne, contributions:authorship:blankclemens, contributions:authorship:bebatut, contributions:authorship:bgruening, contributions:authorship:nsoranzo, contributions:authorship:dyusuf, contributions:authorship:sarah-peter, contributions:authorship:hexylena, contributions:editing:teresa-m, contributions:editing:dadrasarmin, contributions:translation:lisanna, contributions:translation:silviadg87, contributions:translation:unode, contributions:funding:elixir-europe, contributions:funding:deNBI, contributions:funding:uni-freiburg, contributions:funding:biont, contributions:reviewing:shiltemann
Published: 2026-03-19T10:31:24+00:00
Tags:
workflows, introduction, contributions:authorship:shiltemann
This tutorial aims to familiarize you with the Galaxy user interface, with a special focus on highlighting Galaxy’s many RDM (Research Data Management) features.
Published: 2026-03-19T10:31:24+00:00
Tags:
introduction, galaxy-intro, fair, contributions:authorship:shiltemann, contributions:editing:Sch-Da, contributions:testing:Sch-Da, contributions:funding:uni-freiburg, contributions:funding:nfdi4plants, contributions:reviewing:shiltemann, contributions:reviewing:pavanvidem
Wir sind auf eine Publikation (Li et al. 2012) mit dem Titel “The histone
Published: 2026-03-09T14:19:04+00:00
Tags:
introduction, deutsch, español, italiano, contributions:authorship:pajanne, contributions:authorship:blankclemens, contributions:authorship:bebatut, contributions:authorship:bgruening, contributions:authorship:nsoranzo, contributions:authorship:dyusuf, contributions:authorship:sarah-peter, contributions:authorship:hexylena, contributions:editing:teresa-m, contributions:editing:dadrasarmin, contributions:translation:Tillsa, contributions:translation:unode, contributions:funding:elixir-europe, contributions:funding:deNBI, contributions:funding:uni-freiburg, contributions:funding:biont, contributions:reviewing:shiltemann, contributions:reviewing:unode
2026-01-21T17:14:51+00:00
The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their data analysis skills in Galaxy and/or in popular fields in bioinformatics.
Over the course of one week, we offer a diverse selection of learning tracks for you.
Start the Course!
Published: 2026-01-21T17:14:51+00:00
Tags:
event, microbiome, single-cell, proteomics, introduction, galaxy-interface, assembly, statistics, variant-analysis, climate, humanities, ecology, contributions:organisers:delphine-l, contributions:organisers:scottcain, contributions:organisers:natalie-wa, contributions:organisers:shiltemann, contributions:instructors:ahmedhamidawan, contributions:instructors:annasyme, contributions:instructors:annefou, contributions:instructors:anuprulez, contributions:instructors:abretaud, contributions:instructors:nekrut, contributions:instructors:dadrasarmin, contributions:instructors:Nilchia, contributions:instructors:bebatut, contributions:instructors:bgruening, contributions:instructors:clsiguret, contributions:instructors:Sch-Da, contributions:instructors:dannon, contributions:instructors:dianichj, contributions:instructors:deeptivarshney, contributions:instructors:delphine-l, contributions:instructors:elifsu-simula, contributions:instructors:elichad, contributions:instructors:EngyNasr, contributions:instructors:emmaustin20, contributions:instructors:evenmm, contributions:instructors:GarethPrice-Aus, contributions:instructors:hrhotz, contributions:instructors:hvelab, contributions:instructors:igormakunin, contributions:instructors:khaled196, contributions:instructors:jdavcs, contributions:instructors:j34ni, contributions:instructors:jennaj, contributions:instructors:jhahnfeld, contributions:instructors:jochenblom, contributions:instructors:lisanna, contributions:instructors:lfenske-93, contributions:instructors:meltemktn, contributions:instructors:bernt-matthias, contributions:instructors:PfisterMaxJLU, contributions:instructors:foellmelanie, contributions:instructors:meltemktn, contributions:instructors:mschatz, contributions:instructors:hujambo-dunia, contributions:instructors:mirandaembl, contributions:instructors:natalie-wa, contributions:instructors:natefoo, contributions:instructors:Oliver_Rupp, contributions:instructors:oschwengers, contributions:instructors:pauldg, contributions:instructors:PaulineSGN, contributions:instructors:paulzierep, contributions:instructors:pavanvidem, contributions:instructors:plushz, contributions:instructors:poterlowicz-lab, contributions:instructors:pratikdjagtap, contributions:instructors:RZ9082, contributions:instructors:rlibouba, contributions:instructors:reyhaneh-tavakoli, contributions:instructors:SaimMomin12, contributions:instructors:sanjaysrikakulam, contributions:instructors:scottcain, contributions:instructors:silviadg87, contributions:instructors:stephanierobin, contributions:instructors:subinamehta, contributions:instructors:teresa-m, contributions:instructors:timothygriffin, contributions:instructors:tcollins2011, contributions:instructors:nomadscientist, contributions:instructors:wm75, contributions:instructors:yvanlebras, contributions:funding:eurosciencegateway, contributions:funding:biont, contributions:funding:nfdi4plants, contributions:funding:deNBI, contributions:funding:elixir-europe, contributions:funding:mwk, contributions:funding:abromics, contributions:funding:ifb, contributions:funding:FAIR2Adapt, contributions:funding:pndb, contributions:funding:dataterra, contributions:funding:gaiadata
Overview
Published: 2025-11-06T14:24:17+00:00
Tags:
introduction, fair, how-to-cite-galaxy, contributions:authorship:tflowers15, contributions:authorship:GarethPrice-Aus, contributions:authorship:mirelaminkova, contributions:authorship:MarisaJL, contributions:funding:unimelb, contributions:funding:melbournebioinformatics, contributions:funding:AustralianBioCommons, contributions:funding:surf, contributions:reviewing:tflowers15, contributions:reviewing:teresa-m, contributions:reviewing:shiltemann, contributions:reviewing:hexylena, contributions:reviewing:davelopez, contributions:reviewing:bgruening
A 1H41M long recording is now available.
Published: 2025-11-03T00:00:00+00:00
Tags:
introduction, deutsch, español, italiano, contributions:authorship:teresa-m
2025-10-23T19:56:37+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is designed for beginners; no prior programming skills are required.
Published: 2025-10-23T19:56:37+00:00
Tags:
event, introduction, sequence-analysis, epigenetics, transcriptomics, variant-analysis, microbiome, contributions:organisers:Sch-Da, contributions:instructors:dianichj, contributions:instructors:bgruening, contributions:instructors:Nilchia, contributions:instructors:wm75, contributions:instructors:paulzierep, contributions:funding:deNBI, contributions:funding:nfdi4plants
2025-10-13T10:39:07+00:00
The purpose of this workshop is to gain knowledge on detect (foodborne) pathogens from (direct Nanopore) sequencing data using Galaxy. The workshop will be on October 14th 2024 as a 1-day F2F at FHNW Muttenz, Switzerland, free and practical workshop.
Published: 2025-10-13T10:39:07+00:00
Tags:
event, introduction, sequence-analysis, metagenomics, foodborne, contributions:organisers:annahenger, contributions:organisers:abdullahkahraman, contributions:instructors:wm75, contributions:instructors:EngyNasr, contributions:instructors:santamccloud
2025-09-23T15:06:50+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is an intermediate course; there is no requirement of any programming skills.
Published: 2025-09-23T15:06:50+00:00
Tags:
event, introduction, sequence-analysis, transcriptomics, proteomics, contributions:organisers:sebastian-preissl, contributions:instructors:pavanvidem, contributions:instructors:Nilchia, contributions:funding:mwk, contributions:funding:deNBI, contributions:funding:uni-graz
2025-07-02T09:50:50+00:00
Data analysis and programming are high-demand fields, making them particularly attractive to job seekers and employees across various industries and academic institutions. Are you eager to acquire the foundational skills of coding using the Python programming language? The [BioNT consortium](https://biont-training.eu/index.html) is offering a training curriculum for job seekers, SME employers, and everyone who would like to gain new skills in the field of life sciences.
Follow our BioNT self-paced learning Python introduction course using Galaxy as a programming environment, and the learning materials of the [Carpentries](https://carpentries.org/).
Published: 2025-07-02T09:50:50+00:00
Tags:
learning-pathway, python, programming, introduction, beginner
A 24M long recording is now available.
Published: 2025-05-10T00:00:00+00:00
Tags:
introduction, contributions:authorship:nekrut
2025-04-22T17:29:02+00:00
This learning path aims to teach you how to contribute to GTN training materials. From editing typos to rendering test GTN sites, you will progress from being a user to a contributor.
For support throughout these tutorials, join our Galaxy [training network on Matrix](https://matrix.to/#/#Galaxy-Training-Network_Lobby:gitter.im) to ask questions!
Published: 2025-04-22T17:29:02+00:00
Tags:
learning-pathway, introduction, contributing, cofest
2025-03-26T13:14:41+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; no programming skills are required.
Published: 2025-03-26T13:14:41+00:00
Tags:
event, introduction, sequence-analysis, transcriptomics, single-cell, microbiome, contributions:organisers:Sch-Da, contributions:organisers:teresa-m, contributions:instructors:pavanvidem, contributions:instructors:teresa-m, contributions:instructors:dianichj, contributions:instructors:EngyNasr, contributions:instructors:paulzierep, contributions:instructors:minamehr, contributions:funding:eurosciencegateway, contributions:funding:deNBI, contributions:funding:nfdi4plants
A 27M long recording is now available.
Published: 2025-03-18T00:00:00+00:00
Tags:
introduction, español, contributions:authorship:tflowers15
2025-02-10T19:40:45+00:00
The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills.
Over the course of one week, we offer a diverse selection of learning track for you.
Published: 2025-02-10T19:40:45+00:00
Tags:
event, microbiome, single-cell, proteomics, introduction, galaxy-interface, assembly, statistics, variant-analysis, climate, contributions:organisers:delphine-l, contributions:organisers:teresa-m, contributions:organisers:scottcain, contributions:organisers:natalie-wa, contributions:organisers:shiltemann, contributions:organisers:dianichj, contributions:organisers:dadrasarmin, contributions:instructors:ahmedhamidawan, contributions:instructors:annasyme, contributions:instructors:annefou, contributions:instructors:anuprulez, contributions:instructors:abretaud, contributions:instructors:nekrut, contributions:instructors:dadrasarmin, contributions:instructors:Nilchia, contributions:instructors:bebatut, contributions:instructors:bgruening, contributions:instructors:clsiguret, contributions:instructors:Sch-Da, contributions:instructors:dannon, contributions:instructors:dianichj, contributions:instructors:deeptivarshney, contributions:instructors:delphine-l, contributions:instructors:elifsu-simula, contributions:instructors:elichad, contributions:instructors:EngyNasr, contributions:instructors:emmaustin20, contributions:instructors:evenmm, contributions:instructors:GarethPrice-Aus, contributions:instructors:hrhotz, contributions:instructors:hvelab, contributions:instructors:igormakunin, contributions:instructors:khaled196, contributions:instructors:jdavcs, contributions:instructors:j34ni, contributions:instructors:jennaj, contributions:instructors:jhahnfeld, contributions:instructors:jochenblom, contributions:instructors:lisanna, contributions:instructors:lfenske-93, contributions:instructors:bernt-matthias, contributions:instructors:PfisterMaxJLU, contributions:instructors:foellmelanie, contributions:instructors:meltemktn, contributions:instructors:mschatz, contributions:instructors:hujambo-dunia, contributions:instructors:mirandaembl, contributions:instructors:natalie-wa, contributions:instructors:natefoo, contributions:instructors:Oliver_Rupp, contributions:instructors:oschwengers, contributions:instructors:pauldg, contributions:instructors:paulzierep, contributions:instructors:pavanvidem, contributions:instructors:plushz, contributions:instructors:poterlowicz-lab, contributions:instructors:pratikdjagtap, contributions:instructors:RZ9082, contributions:instructors:rlibouba, contributions:instructors:reyhaneh-tavakoli, contributions:instructors:SaimMomin12, contributions:instructors:sanjaysrikakulam, contributions:instructors:scottcain, contributions:instructors:silviadg87, contributions:instructors:stephanierobin, contributions:instructors:subinamehta, contributions:instructors:teresa-m, contributions:instructors:timothygriffin, contributions:instructors:tcollins2011, contributions:instructors:nomadscientist, contributions:instructors:wm75, contributions:funding:eurosciencegateway, contributions:funding:biont, contributions:funding:nfdi4plants, contributions:funding:deNBI, contributions:funding:elixir-europe, contributions:funding:mwk, contributions:funding:abromics, contributions:funding:ifb, contributions:funding:FAIR2Adapt
2024-10-15T12:38:08+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; no programming skills are required.
Published: 2024-10-15T12:38:08+00:00
Tags:
event, introduction, sequence-analysis, epigenetics, transcriptomics, variant-analysis, microbiome, contributions:organisers:Sch-Da, contributions:organisers:teresa-m, contributions:instructors:pavanvidem, contributions:instructors:Nilchia, contributions:instructors:teresa-m, contributions:instructors:wm75, contributions:instructors:EngyNasr, contributions:instructors:paulzierep, contributions:funding:eurosciencegateway, contributions:funding:deNBI, contributions:funding:nfdi4plants
A 18M long recording is now available.
Published: 2024-09-16T00:00:00+00:00
Tags:
introduction, galaxy-intro, contributions:authorship:natalie-wa
2024-07-10T17:01:39+00:00
This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; no programming skills are required.
Published: 2024-07-10T17:01:39+00:00
Tags:
event, microbiome, transcriptomics, sequence-analysis, introduction, epigenetics, variant-analysis, contributions:organisers:erxleben, contributions:instructors:erxleben, contributions:instructors:pavanvidem, contributions:instructors:Nilchia, contributions:instructors:teresa-m, contributions:instructors:wm75, contributions:instructors:EngyNasr, contributions:instructors:paulzierep, contributions:funding:eurosciencegateway, contributions:funding:deNBI
2024-07-03T08:50:25+00:00
Join us for an engaging 4-half day online workshop and dive into the captivating world of RNA-seq data analysis using Galaxy! This hands-on workshop will equip you with the skills to effectively analyze RNA-seq data from start to finish. You will learn about: Galaxy, Quality Control, Mapping and Quantification and Downstream Analysis. Don't miss this opportunity to enhance your bioinformatics skills.
Published: 2024-07-03T08:50:25+00:00
Tags:
event, transcriptomics, sequence-analysis, introduction, contributions:organisers:teresa-m, contributions:instructors:pavanvidem, contributions:instructors:teresa-m, contributions:funding:biont
2024-06-11T15:07:31+00:00
The Galaxy Academy is a self-paced online training event for beginners as well as learners who would like to improve their Galaxy data analysis skills. Over the course of one week, we will have a different topic and focus every day.
Start the Course!
Published: 2024-06-11T15:07:31+00:00
Tags:
event, microbiome, single-cell, proteomics, introduction, galaxy-interface, ecology, assembly, one-health, statistics, contributions:organisers:teresa-m, contributions:organisers:natalie-wa, contributions:organisers:nakucher, contributions:organisers:erxleben, contributions:organisers:annasyme, contributions:organisers:nekrut, contributions:organisers:dannon, contributions:organisers:delphine-l, contributions:organisers:GarethPrice-Aus, contributions:organisers:jdavcs, contributions:organisers:mschatz, contributions:organisers:shiltemann, contributions:instructors:ahmedhamidawan, contributions:instructors:erxleben, contributions:instructors:annasyme, contributions:instructors:anuprulez, contributions:instructors:abretaud, contributions:instructors:bebatut, contributions:instructors:bgruening, contributions:instructors:clsiguret, contributions:instructors:dannon, contributions:instructors:dianichj, contributions:instructors:deeptivarshney, contributions:instructors:delphine-l, contributions:instructors:elichad, contributions:instructors:EngyNasr, contributions:instructors:emmaustin20, contributions:instructors:GarethPrice-Aus, contributions:instructors:igormakunin, contributions:instructors:jdavcs, contributions:instructors:lldelisle, contributions:instructors:bernt-matthias, contributions:instructors:foellmelanie, contributions:instructors:mschatz, contributions:instructors:natalie-wa, contributions:instructors:natefoo, contributions:instructors:paulzierep, contributions:instructors:pavanvidem, contributions:instructors:plushz, contributions:instructors:pratikdjagtap, contributions:instructors:RZ9082, contributions:instructors:rlibouba, contributions:instructors:SaimMomin12, contributions:instructors:stephanierobin, contributions:instructors:subinamehta, contributions:instructors:teresa-m, contributions:instructors:timothygriffin, contributions:instructors:tcollins2011, contributions:instructors:nomadscientist, contributions:instructors:wm75, contributions:funding:eurosciencegateway, contributions:funding:biont, contributions:funding:nfdi4plants, contributions:funding:deNBI, contributions:funding:by-covid, contributions:funding:elixir-europe, contributions:funding:mwk, contributions:funding:abromics, contributions:funding:ifb
A 1H30M long recording is now available.
Published: 2023-05-18T00:00:00+00:00
Tags:
introduction, contributions:authorship:nakucher
A 20M long recording is now available.
Published: 2023-05-01T00:00:00+00:00
Tags:
introduction, contributions:authorship:astrovsky01
2023-04-13T15:51:25+00:00
This learning path aims to teach you the basics of Galaxy and analysis of sequencing data.
You will learn how to use Galaxy for analysis, and will be guided through the most common
first steps of any genome analysis; quality control and a mapping or assembly of your genomic
sequences.
Published: 2023-04-13T15:51:25+00:00
Tags:
learning-pathway, beginner, introduction, sequence-analysis, assembly
Many analyses in Galaxy require small data manipulations in between tools as a sort of “glue” between analysis steps. For example, you may need to change the file format, re-order columns in a table, replace certain values, or perform some filtering operation, before you can proceed to the next step of your analysis. Galaxy offers a wide range of tools that can perform such generic data manipulation tasks, and mastering these types of operations in Galaxy can help you streamline your analysis and get the most out of Galaxy.
Published: 2022-09-11T00:00:00+00:00
Tags:
news, new tutorial, introduction, contributions:authorship:shiltemann
2022-07-20T16:55:39+00:00
Data Manipulation Olympics
Published: 2022-07-20T16:55:39+00:00
Tags:
workflows, introduction
Scientific analyses often consist of a number of tools that run one after the other, in order to go from the raw data to scientific insight. Between these specialized tools, simple data manipulation steps are often needed as a kind of “glue” between tools. For example, the output of tool A may produce a file that contains all the information needed as input for tool B, but tool B expects the columns in a different order. Or in genomic data analysis, some tools expect chromosome X to be listed as chrX, while others simply expect X. In these situations, extra data manipulation steps are needed to prepare files for input to analysis tools.
Published: 2022-07-20T16:55:39+00:00
Tags:
introduction, cyoa, galaxy-intro, contributions:authorship:shiltemann, contributions:authorship:lybCNU, contributions:editing:hexylena, contributions:editing:scottcain, contributions:funding:gallantries, contributions:reviewing:shiltemann, contributions:reviewing:lybCNU, contributions:reviewing:hexylena, contributions:reviewing:dirowa, contributions:reviewing:bgruening, contributions:reviewing:Sch-Da, contributions:reviewing:scottcain, contributions:reviewing:pavanvidem
The query for sars-cov-2 in SRA Entrez returns over 250K results, but only the first 20k are sent to the Run Selector. Enter the above query in Entrez directly to find the three runs used for the tutorial and send them to the Run Selector to send to Galaxy.
Published: 2022-03-02T15:46:20+00:00
Tags:
faqs, introduction, contributions:authorship:nekrut
This tutorial uses UCSC which is constantly updating it’s data! As a result it gets outdated very quickly before we can update it :( But it’s ok! It’s expected here to get different numbers.
Published: 2021-11-17T06:38:37+00:00
Tags:
faqs, introduction, contributions:authorship:rahmot
Please make sure you are logged in. At the top menu bar, you should see a section labeled “User”. If you see “Login/Register” here you are not logged in.
Published: 2021-11-17T06:38:37+00:00
Tags:
faqs, introduction, contributions:authorship:rahmot
Galaxy gets frequent updates, different servers will be running different versions. This is nothing to worry about, just let us know if you can’t find how to perform a task in your Galaxy.
Published: 2021-11-17T06:38:37+00:00
Tags:
faqs, introduction, contributions:authorship:rahmot
This is a known bug with Chrome + Galaxy, we’re working on it galaxyproject/galaxy#11374. For now we can recommend using Firefox (known to work) or trying another browser.
Published: 2021-11-17T06:38:37+00:00
Tags:
faqs, introduction, contributions:authorship:rahmot
The Galaxy interface has changed a bit recently, “Analyze Data” was always the home button, and now looks like a home icon.
Published: 2021-11-17T06:38:37+00:00
Tags:
faqs, introduction, contributions:authorship:rahmot
¿Qué es Galaxy?
Published: 2021-10-19T15:27:18+00:00
Tags:
introduction, español, contributions:authorship:shiltemann, contributions:authorship:hexylena, contributions:authorship:nsoranzo, contributions:authorship:nomadscientist, contributions:reviewing:shiltemann, contributions:reviewing:mtekman, contributions:reviewing:hexylena
¿Qué es Galaxy?
Published: 2021-09-21T12:07:26+00:00
Tags:
introduction, español, contributions:authorship:shiltemann, contributions:authorship:hexylena, contributions:authorship:npalopoli, contributions:authorship:jrr-cpt, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:beatrizserrano, contributions:reviewing:gallardoalba, contributions:reviewing:nomadscientist
2021-08-25T11:53:53+00:00
introduction
Published: 2021-08-25T11:53:53+00:00
Tags:
workflows, introduction
This training will demonstrate how to reproduce analyses performed in the Galaxy framework. Before we start with the hands-on part, we would like to give you some information about Galaxy.
Published: 2021-08-25T11:53:53+00:00
Tags:
introduction, galaxy-intro, contributions:authorship:foellmelanie, contributions:authorship:annefou, contributions:funding:uni-freiburg, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:lldelisle, contributions:reviewing:mtekman, contributions:reviewing:foellmelanie, contributions:reviewing:bgruening, contributions:reviewing:pavanvidem
A 13M long recording is now available.
Published: 2021-07-21T00:00:00+00:00
Tags:
introduction, galaxy-intro, contributions:authorship:nekrut
Descripción General
Published: 2021-05-20T14:37:14+00:00
Tags:
introduction, español, contributions:authorship:annasyme, contributions:authorship:pclo, contributions:authorship:ales-ibt, contributions:funding:unimelb, contributions:funding:melbournebioinformatics, contributions:funding:AustralianBioCommons, contributions:reviewing:shiltemann, contributions:reviewing:hexylena, contributions:reviewing:beatrizserrano, contributions:reviewing:nomadscientist, contributions:reviewing:gallardoalba, contributions:reviewing:davelopez
¡El primer tutorial en español ya está disponible! Galaxy siempre ha tenido tutoriales traducidos automáticamente mediante Google-Translate, ahora nos estamos embarcando en un nuevo proyecto para estudiar la experiencia de aprendizaje con tutoriales en bioinformática traducidos por humanos. Nuestro objetivo es crear un paquete de tutoriales para el análisis de datos single-cell (célula única) en primera instancia, con el fin de estudiar su uso y utilidad en un taller para hablantes nativos de español. Agradecemos enormemente a las nuevas participantes
Published: 2021-05-20T00:00:00+00:00
Tags:
news, new tutorial, español, introduction, contributions:authorship:nomadscientist, contributions:authorship:beatrizserrano, contributions:authorship:pclo, contributions:authorship:ales-ibt, contributions:authorship:shiltemann, contributions:authorship:hexylena
A 1H30M long recording is now available.
Published: 2021-02-15T00:00:00+00:00
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introduction, contributions:authorship:tnabtaf
A 15M long recording is now available.
Published: 2021-02-15T00:00:00+00:00
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introduction, contributions:authorship:nekrut
A 1H15M long recording is now available.
Published: 2021-02-15T00:00:00+00:00
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introduction, contributions:authorship:annefou, contributions:authorship:rwinand
NGS data logistics
Published: 2021-02-12T14:51:24+00:00
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workflows, introduction, introductions, contributions:authorship:Anton Nekrutenko, contributions:authorship:mvdbeek, contributions:authorship:tnabtaf, contributions:authorship:blankenberg, contributions:authorship:dadrasarmin
What is Galaxy?
Published: 2020-11-04T12:08:58+00:00
Tags:
introduction, español, contributions:authorship:shiltemann, contributions:authorship:hexylena, contributions:authorship:nsoranzo, contributions:authorship:ahmedhamidawan, contributions:reviewing:bgruening, contributions:reviewing:shiltemann, contributions:reviewing:hexylena, contributions:reviewing:mtekman, contributions:reviewing:nsoranzo, contributions:reviewing:martenson, contributions:reviewing:gallardoalba, contributions:reviewing:beatrizserrano, contributions:reviewing:nomadscientist, contributions:reviewing:davelopez, contributions:reviewing:bebatut
2020-10-20T09:09:01+00:00
Galaxy Introduction Peaks2Genes - Part 1
Published: 2020-10-20T09:09:01+00:00
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workflows, introduction
Galaxy 101
Published: 2020-10-18T18:50:21+00:00
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workflows, introduction, contributions:authorship:Anton Nekrutenko, contributions:authorship:hexylena, contributions:authorship:dadrasarmin
2019-11-14T09:26:37+00:00
introduction
Published: 2019-11-14T09:26:37+00:00
Tags:
workflows, introduction
This practical aims at familiarizing you with the Galaxy user interface.
Published: 2019-11-14T09:26:37+00:00
Tags:
introduction, contributions:authorship:annefou, contributions:authorship:nagoue, contributions:authorship:chrisbarnettster, contributions:authorship:michelemaroni, contributions:authorship:olanag1, contributions:authorship:tnabtaf, contributions:authorship:shiltemann, contributions:funding:elixir-europe, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:bernt-matthias, contributions:reviewing:nsoranzo, contributions:reviewing:annefou, contributions:reviewing:michelemaroni, contributions:reviewing:martenson, contributions:reviewing:jennaj, contributions:reviewing:nagoue, contributions:reviewing:abretaud, contributions:reviewing:bgruening, contributions:reviewing:astrovsky01, contributions:reviewing:melpetera, contributions:reviewing:natefoo, contributions:reviewing:davelopez, contributions:reviewing:bebatut, contributions:reviewing:nomadscientist
2018-11-15T14:31:50+00:00
Introduction to Genomics and Galaxy
Published: 2018-11-15T14:31:50+00:00
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workflows, introduction
2018-11-15T14:31:50+00:00
Introduction to Genomics and Galaxy
Published: 2018-11-15T14:31:50+00:00
Tags:
workflows, introduction
2018-09-26T07:13:24+00:00
A short introduction to Galaxy
Published: 2018-09-26T07:13:24+00:00
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workflows, introduction
Overview
Published: 2018-08-27T09:41:28+00:00
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introduction, español, contributions:authorship:annasyme, contributions:authorship:nsoranzo, contributions:editing:bebatut, contributions:editing:ahmedhamidawan, contributions:editing:PhilReedData, contributions:funding:AustralianBioCommons, contributions:funding:unimelb, contributions:funding:melbournebioinformatics, contributions:funding:elixir-europe, contributions:funding:uni-freiburg, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:gallardoalba, contributions:reviewing:bgruening, contributions:reviewing:mtekman, contributions:reviewing:bedroesb, contributions:reviewing:nsoranzo, contributions:reviewing:mvdbeek, contributions:reviewing:beatrizserrano, contributions:reviewing:nomadscientist, contributions:reviewing:davelopez, contributions:reviewing:bebatut, contributions:reviewing:mblue9, contributions:reviewing:PhilReedData, contributions:reviewing:hexhowells, contributions:reviewing:teresa-m
This practical aims to familiarize you with the Galaxy user interface. It will teach you how to perform basic tasks such as importing data, running tools, working with histories, creating workflows, and sharing your work.
Published: 2017-10-18T16:00:54+00:00
Tags:
introduction, contributions:authorship:tnabtaf, contributions:authorship:gallardoalba, contributions:funding:elixir-europe, contributions:funding:deNBI, contributions:funding:uni-freiburg, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:yvanlebras, contributions:reviewing:sebastian-schaaf, contributions:reviewing:nsoranzo, contributions:reviewing:bgruening, contributions:reviewing:lecorguille, contributions:reviewing:pvanheus, contributions:reviewing:tnabtaf, contributions:reviewing:gallardoalba, contributions:reviewing:bebatut, contributions:reviewing:sandygudie, contributions:reviewing:njall, contributions:reviewing:mblue9
Options for using Galaxy
Published: 2017-05-24T15:51:24+00:00
Tags:
introduction, contributions:authorship:tnabtaf, contributions:authorship:abretaud, contributions:authorship:pajanne, contributions:authorship:nsoranzo, contributions:authorship:alaaelghamry, contributions:reviewing:shiltemann, contributions:reviewing:hexylena, contributions:reviewing:bgruening, contributions:reviewing:gallardoalba, contributions:reviewing:nsoranzo, contributions:reviewing:Alaa-Elghamry, contributions:reviewing:tnabtaf, contributions:reviewing:bebatut, contributions:reviewing:willdurand
Published: 2017-02-22T11:51:41+00:00
Tags:
introduction, contributions:authorship:nekrut, contributions:authorship:mvdbeek, contributions:authorship:tnabtaf, contributions:authorship:blankenberg, contributions:editing:dadrasarmin, contributions:reviewing:hexylena, contributions:reviewing:shiltemann, contributions:reviewing:mtekman, contributions:reviewing:nsoranzo, contributions:reviewing:bgruening, contributions:reviewing:nekrut, contributions:reviewing:jdavcs, contributions:reviewing:willdurand, contributions:reviewing:bebatut, contributions:reviewing:njall, contributions:reviewing:dadrasarmin, contributions:reviewing:teresa-m, contributions:reviewing:wm75
This tutorial aims to familiarize you with the Galaxy user interface. It will teach you how to perform basic tasks such as importing data, running tools, working with histories, creating workflows, and sharing your work.
Published: 2016-12-19T08:59:53+00:00
Tags:
introduction, galaxy-intro, contributions:authorship:shiltemann, contributions:authorship:nsoranzo, contributions:authorship:blankclemens, contributions:authorship:nekrut, contributions:authorship:bgruening, contributions:authorship:pajanne, contributions:authorship:hexylena, contributions:editing:dadrasarmin, contributions:funding:psu, contributions:funding:erasmusmc, contributions:funding:elixir-europe, contributions:funding:uni-freiburg, contributions:funding:deNBI, contributions:reviewing:hexylena, contributions:reviewing:teresa-m, contributions:reviewing:bgruening, contributions:reviewing:shiltemann, contributions:reviewing:bernt-matthias, contributions:reviewing:nekrut, contributions:reviewing:nsoranzo, contributions:reviewing:bebatut, contributions:reviewing:lecorguille, contributions:reviewing:gallardoalba, contributions:reviewing:natefoo, contributions:reviewing:davelopez, contributions:reviewing:wm75, contributions:reviewing:tnabtaf, contributions:reviewing:willdurand, contributions:reviewing:njall, contributions:reviewing:mblue9, contributions:reviewing:dadrasarmin, contributions:reviewing:pavanvidem
What is Galaxy?
Published: 2016-09-30T12:51:14+00:00
Tags:
introduction, contributions:authorship:bagnacan, contributions:authorship:bebatut, contributions:authorship:shiltemann, contributions:authorship:pajanne, contributions:authorship:nsoranzo, contributions:authorship:hexylena, contributions:authorship:chrisbarnettster, contributions:authorship:michelemaroni, contributions:authorship:annefou, contributions:authorship:nagoue, contributions:authorship:olanag1, contributions:authorship:tnabtaf, contributions:reviewing:hexylena, contributions:reviewing:bebatut, contributions:reviewing:shiltemann, contributions:reviewing:nsoranzo, contributions:reviewing:annefou, contributions:reviewing:michelemaroni, contributions:reviewing:martenson, contributions:reviewing:jennaj, contributions:reviewing:nagoue, contributions:reviewing:abretaud, contributions:reviewing:bgruening, contributions:reviewing:gallardoalba, contributions:reviewing:davelopez, contributions:reviewing:tnabtaf, contributions:reviewing:willdurand, contributions:reviewing:bagnacan, contributions:reviewing:nomadscientist
We stumbled upon a paper (Li et al. 2012) called “The histone acetyltransferase MOF is a key regulator of the embryonic stem cell core transcriptional network”. The paper contains the analysis of possible target genes of an interesting protein called Mof. The targets were obtained by ChIP-seq in mice and the raw data is available through GEO.
Published: 2016-03-29T15:19:58+00:00
Tags:
introduction, deutsch, español, italiano, contributions:authorship:pajanne, contributions:authorship:blankclemens, contributions:authorship:bebatut, contributions:authorship:bgruening, contributions:authorship:nsoranzo, contributions:authorship:dyusuf, contributions:authorship:sarah-peter, contributions:authorship:hexylena, contributions:editing:teresa-m, contributions:editing:dadrasarmin, contributions:funding:elixir-europe, contributions:funding:deNBI, contributions:funding:uni-freiburg, contributions:reviewing:hexylena, contributions:reviewing:bgruening, contributions:reviewing:shiltemann, contributions:reviewing:nsoranzo, contributions:reviewing:bebatut, contributions:reviewing:bedroesb, contributions:reviewing:lecorguille, contributions:reviewing:natefoo, contributions:reviewing:davelopez, contributions:reviewing:hrhotz, contributions:reviewing:blankclemens, contributions:reviewing:tnabtaf, contributions:reviewing:willdurand, contributions:reviewing:cmonjeau, contributions:reviewing:njall, contributions:reviewing:mblue9, contributions:reviewing:dadrasarmin, contributions:reviewing:heylf, contributions:reviewing:deeptivarshney, contributions:reviewing:teresa-m, contributions:reviewing:unode