FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset
Integrating InvenioRDM-compatible Repositories with Galaxy
Uploading Data to Zenodo from Galaxy

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

Stella Eggels avatar Stella Eggelsorcid logoSimone Leo avatar Simone LeoKellie Snow avatar Kellie Snoworcid logoNick Juty avatar Nick JutyDavid López avatar David Lópezorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoSara Morsy avatar Sara Morsyorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoHelena Rasche avatar Helena Rascheorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoMartin Kuhl avatar Martin Kuhlorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoXenia Perez Sitja avatar Xenia Perez SitjaLaura Cooper avatar Laura CooperGareth Price avatar Gareth Priceorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoPeter Sefton avatar Peter Seftonorcid logoBranka Franicevic avatar Branka Franicevicorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoMartin Čech avatar Martin ČechMartin Carrere avatar Martin Carrereorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoKevin Rue-Albrecht avatar Kevin Rue-AlbrechtSonal Henson avatar Sonal Hensonorcid logoArmin Dadras avatar Armin Dadrasorcid logoMarie Josse avatar Marie Josseorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoKevin Frey avatar Kevin Freyorcid logoRobert Andrews avatar Robert Andrewsorcid logoJulia Jakiela avatar Julia Jakielaorcid logoEmily Angiolini avatar Emily AngioliniKorneel Hens avatar Korneel Hensorcid logoEli Chadwick avatar Eli Chadwickorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoBjörn Grüning avatar Björn Grüningorcid logoLuca Pireddu avatar Luca PiredduLaura Cooper avatar Laura Cooperorcid logoSaskia Hiltemann avatar Saskia HiltemannSandra Ng avatar Sandra Ngorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAndrew Mason avatar Andrew Masonorcid logoWendi Bacon avatar Wendi Baconorcid logoSabrina Zander avatar Sabrina Zanderorcid logoPaul De Geest avatar Paul De Geestorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoTeresa Müller avatar Teresa MüllerTim Beck avatar Tim Beck

Funding

These individuals or organisations provided funding support for the development of this resource