FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Community Home Maintainer Home

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoBranka Franicevic avatar Branka FranicevicSonal Henson avatar Sonal Hensonorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoMartin Čech avatar Martin Čechorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoSimone Leo avatar Simone LeoMarie Josse avatar Marie Josseorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoEmily Angiolini avatar Emily Angioliniorcid logoJulia Jakiela avatar Julia Jakielaorcid logoNicola Soranzo avatar Nicola SoranzoTim Beck avatar Tim BeckKorneel Hens avatar Korneel Hensorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoDominik Brilhaus avatar Dominik BrilhausGareth Price avatar Gareth Priceorcid logoWendi Bacon avatar Wendi Baconorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoArmin Dadras avatar Armin Dadrasorcid logoKevin Frey avatar Kevin Freyorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoHelena Rasche avatar Helena Rascheorcid logoRobert Andrews avatar Robert AndrewsLaura Cooper avatar Laura CooperLaura Cooper avatar Laura Cooperorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoPaul De Geest avatar Paul De Geestorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoSabrina Zander avatar Sabrina Zanderorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAndrew Mason avatar Andrew Masonorcid logoEli Chadwick avatar Eli Chadwickorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoNick Juty avatar Nick Jutyorcid logoTeresa Müller avatar Teresa Müllerorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoPeter Sefton avatar Peter SeftonKellie Snow avatar Kellie Snoworcid logoSara Morsy avatar Sara Morsyorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-ToveySandra Ng avatar Sandra NgDavid López avatar David Lópezorcid logoBjörn Grüning avatar Björn Grüningorcid logoLuca Pireddu avatar Luca Piredduorcid logoCristina Martins Rodrigues avatar Cristina Martins RodriguesStella Eggels avatar Stella Eggelsorcid logoMartin Kuhl avatar Martin Kuhl

Funding

These individuals or organisations provided funding support for the development of this resource