FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoBranka Franicevic avatar Branka Franicevicorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoNick Juty avatar Nick Jutyorcid logoPaul De Geest avatar Paul De Geestorcid logoArmin Dadras avatar Armin Dadrasorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoSaskia Hiltemann avatar Saskia HiltemannGareth Price avatar Gareth Priceorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoKevin Frey avatar Kevin Freyorcid logoSara Morsy avatar Sara Morsyorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoJulia Jakiela avatar Julia Jakielaorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoTeresa Müller avatar Teresa Müllerorcid logoWendi Bacon avatar Wendi Baconorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoSimone Leo avatar Simone LeoStella Eggels avatar Stella Eggelsorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoXenia Perez Sitja avatar Xenia Perez SitjaDavid López avatar David Lópezorcid logoMartin Čech avatar Martin ČechMarie Josse avatar Marie JosseKellie Snow avatar Kellie Snoworcid logoRobert Andrews avatar Robert AndrewsLaura Cooper avatar Laura Cooperorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoLuca Pireddu avatar Luca Piredduorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoSabrina Zander avatar Sabrina Zanderorcid logoBjörn Grüning avatar Björn Grüningorcid logoPeter Sefton avatar Peter Seftonorcid logoEmily Angiolini avatar Emily Angioliniorcid logoKhaled Jum'ah avatar Khaled Jum'ahSonal Henson avatar Sonal HensonKorneel Hens avatar Korneel Hensorcid logoEli Chadwick avatar Eli Chadwickorcid logoHelena Rasche avatar Helena RascheTim Beck avatar Tim Beckorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoMartin Kuhl avatar Martin Kuhlorcid logoMarco Enrico Piras avatar Marco Enrico PirasSandra Ng avatar Sandra NgLaura Cooper avatar Laura Cooperorcid logoAndrew Mason avatar Andrew Mason

Funding

These individuals or organisations provided funding support for the development of this resource