FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset
Integrating InvenioRDM-compatible Repositories with Galaxy
Uploading Data to Zenodo from Galaxy

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoSimone Leo avatar Simone Leoorcid logoTeresa Müller avatar Teresa Müllerorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-GonzalezDavid López avatar David Lópezorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoSaskia Hiltemann avatar Saskia HiltemannLaura Cooper avatar Laura CooperKellie Snow avatar Kellie Snoworcid logoKevin Rue-Albrecht avatar Kevin Rue-AlbrechtKorneel Hens avatar Korneel Hensorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoSara Morsy avatar Sara Morsyorcid logoMartin Čech avatar Martin Čechorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoBranka Franicevic avatar Branka Franicevicorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoHelena Rasche avatar Helena Rascheorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoAndrew Mason avatar Andrew Masonorcid logoMartin Kuhl avatar Martin Kuhlorcid logoPeter Sefton avatar Peter SeftonStella Eggels avatar Stella Eggelsorcid logoPaul De Geest avatar Paul De Geestorcid logoNick Juty avatar Nick Jutyorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoBjörn Grüning avatar Björn Grüningorcid logoRobert Andrews avatar Robert Andrewsorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoKevin Frey avatar Kevin FreySandra Ng avatar Sandra Ngorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoJulia Jakiela avatar Julia Jakielaorcid logoKatarzyna Kamieniecka avatar Katarzyna KamienieckaTim Beck avatar Tim Beckorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoLuca Pireddu avatar Luca Piredduorcid logoEmily Angiolini avatar Emily Angioliniorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoLaura Cooper avatar Laura CooperGareth Price avatar Gareth Priceorcid logoSabrina Zander avatar Sabrina Zanderorcid logoArmin Dadras avatar Armin Dadrasorcid logoWendi Bacon avatar Wendi BaconMarie Josse avatar Marie Josseorcid logoEli Chadwick avatar Eli ChadwickSonal Henson avatar Sonal Hensonorcid logoMunazah Andrabi avatar Munazah Andrabi

Funding

These individuals or organisations provided funding support for the development of this resource