metabarcoding

Tutorials covering metabarcoding

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Ecology

Lesson Slides Hands-on Recordings Input dataset Workflows
Metabarcoding/eDNA through Obitools
genetic composition EBV class community composition EBV class EBV dataset EBV workflow eDNA metabarcoding biodiversity
Taxonomic Analysis of eDNA
biodiversity metabarcoding

Microbiome

Lesson Slides Hands-on Recordings Input dataset Workflows
16S Microbial analysis with Nanopore data
metabarcoding 16S nanopore microgalaxy plants
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
metabarcoding 16S microgalaxy
QIIME 2 Cancer Microbiome Intervention
metabarcoding 16S taxonomic profiling diversity microgalaxy
16S Microbial Analysis with mothur (extended)
metabarcoding 16S microgalaxy
16S Microbial Analysis with mothur (short)
metabarcoding 16S microgalaxy

Contributors

This material was contributed to by:

orcid logoPaul Zierep avatar Paul Ziereporcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoBert Droesbeke avatar Bert DroesbekeNiall Beard avatar Niall Beardorcid logoColine Royaux avatar Coline Royauxorcid logoAnna Syme avatar Anna SymeOlivier Norvez avatar Olivier NorvezMichael Thang avatar Michael ThangJohn Beliveau avatar John Beliveauorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoDeepti Varshney avatar Deepti VarshneyIgor Makunin avatar Igor Makuninorcid logoDave Clements avatar Dave ClementsEric Coissac avatar Eric Coissacorcid logoSantino Faack avatar Santino FaackMarie Josse avatar Marie Josseorcid logoBérénice Batut avatar Bérénice BatutWilliam Durand avatar William Durandorcid logoLinelle Abueg avatar Linelle Abuegorcid logoClea Siguret avatar Clea Siguretorcid logoHelena Rasche avatar Helena Rascheorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoNicola Soranzo avatar Nicola SoranzoFrédéric Boyer avatar Frédéric BoyerMatthias Bernt avatar Matthias Berntorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoBjörn Grüning avatar Björn Grüning

Funding

These individuals or organisations provided funding support for the development of this resource

Logo
Gallantries
This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
Logo
The University of Melbourne
Logo
Australian BioCommons
Logo
Melbourne Bioinformatics
Logo
PNDB