metabarcoding

Tutorials covering metabarcoding

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Ecology

Lesson Slides Hands-on Recordings Input dataset Workflows
Metabarcoding/eDNA through Obitools
Taxonomic Analysis of eDNA

Microbiome

Lesson Slides Hands-on Recordings Input dataset Workflows
16S Microbial analysis with Nanopore data
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
QIIME 2 Cancer Microbiome Intervention external-link
16S Microbial Analysis with mothur (extended)
16S Microbial Analysis with mothur (short)

Contributors

This material was contributed to by:

Niall Beard avatar Niall BeardMarie Josse avatar Marie JosseWilliam Durand avatar William Durandorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoPaul Zierep avatar Paul ZierepJohn Beliveau avatar John Beliveauorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoDave Clements avatar Dave Clementsorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBérénice Batut avatar Bérénice BatutEric Coissac avatar Eric Coissacorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoSantino Faack avatar Santino Faackorcid logoHelena Rasche avatar Helena Rascheorcid logoClea Siguret avatar Clea Siguretorcid logoColine Royaux avatar Coline RoyauxFrédéric Boyer avatar Frédéric Boyerorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoDeepti Varshney avatar Deepti VarshneyOlivier Norvez avatar Olivier NorvezMichael Thang avatar Michael Thangorcid logoLinelle Abueg avatar Linelle Abuegorcid logoBjörn Grüning avatar Björn Grüningorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAnne Fouilloux avatar Anne FouillouxIgor Makunin avatar Igor Makuninorcid logoAnna Syme avatar Anna SymeMatthias Bernt avatar Matthias Bernt

Funding

These individuals or organisations provided funding support for the development of this resource