metabarcoding

Tutorials covering metabarcoding

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Ecology

Lesson Slides Hands-on Recordings Input dataset Workflows
Metabarcoding/eDNA through Obitools
Taxonomic Analysis of eDNA

Microbiome

Lesson Slides Hands-on Recordings Input dataset Workflows
16S Microbial analysis with Nanopore data
Building an amplicon sequence variant (ASV) table from 16S data using DADA2
Metabarcoding of bacteria in dunnart faecal samples across Australia (wild + captive) using QIIME 2
QIIME 2 Cancer Microbiome Intervention external-link
16S Microbial Analysis with mothur (extended)
16S Microbial Analysis with mothur (short)

Contributors

This material was contributed to by:

orcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoDave Clements avatar Dave Clementsorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoHelena Rasche avatar Helena Rascheorcid logoMatthias Bernt avatar Matthias Berntorcid logoClea Siguret avatar Clea Siguretorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoBérénice Batut avatar Bérénice Batutorcid logoMarie Josse avatar Marie Josseorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoLaura Geissler avatar Laura Geisslerorcid logoColine Royaux avatar Coline Royauxorcid logoTristan Reynolds avatar Tristan ReynoldsOlivier Norvez avatar Olivier NorvezJohn Beliveau avatar John Beliveauorcid logoAnna Syme avatar Anna SymeFrédéric Boyer avatar Frédéric Boyerorcid logoSaskia Hiltemann avatar Saskia HiltemannNiall Beard avatar Niall Beardorcid logoPaul Zierep avatar Paul ZierepEric Coissac avatar Eric Coissacorcid logoSantino Faack avatar Santino FaackWilliam Durand avatar William Durandorcid logoLinelle Abueg avatar Linelle AbuegIgor Makunin avatar Igor Makuninorcid logoGayle Philip avatar Gayle PhilipEmma Gail avatar Emma Gailorcid logoBjörn Grüning avatar Björn GrüningMichael Thang avatar Michael Thangorcid logoAshley Dungan avatar Ashley Dungan

Funding

These individuals or organisations provided funding support for the development of this resource