Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Community Home Maintainer Home

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoClemens Blank avatar Clemens BlankAlaa Elghamry avatar Alaa ElghamryWilliam Durand avatar William Durandorcid logoTeresa Müller avatar Teresa Müllerorcid logoLucille Delisle avatar Lucille Delisleorcid logoJohn Davis avatar John Davisorcid logoAlex Ostrovsky avatar Alex OstrovskyJoachim Wolff avatar Joachim WolffDavid López avatar David Lópezorcid logoBert Droesbeke avatar Bert DroesbekeGareth Price avatar Gareth Priceorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoMelanie Föll avatar Melanie FöllYongbin Li avatar Yongbin Liorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzSarah Peter avatar Sarah Peterorcid logoMatthias Bernt avatar Matthias Berntorcid logoMartin Čech avatar Martin Čechorcid logoCristóbal Gallardo avatar Cristóbal GallardoChristopher Barnett avatar Christopher BarnettScott Cain avatar Scott Cainorcid logoRenato Alves avatar Renato AlvesSebastian Schaaf avatar Sebastian Schaaforcid logoDaniela Schneider avatar Daniela Schneiderorcid logoPavankumar Videm avatar Pavankumar VidemGildas Le Corguillé avatar Gildas Le Corguilléorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAnup Kumar avatar Anup KumarMélanie Petera avatar Mélanie Peteraorcid logoArmin Dadras avatar Armin DadrasOlha Nahorna avatar Olha Nahornaorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoDave Clements avatar Dave ClementsMirela Minkova avatar Mirela Minkovaorcid logoMorgan Howells avatar Morgan Howellsorcid logoHelena Rasche avatar Helena RascheMichele Maroni avatar Michele Maroniorcid logoDeepti Varshney avatar Deepti VarshneyNiall Beard avatar Niall Beardorcid logoMaria Doyle avatar Maria Doyleorcid logoAnna Syme avatar Anna SymeAnton Nekrutenko avatar Anton Nekrutenkoorcid logoMarius van den Beek avatar Marius van den Beekorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoFlorian Heyl avatar Florian HeylMehmet Tekman avatar Mehmet Tekmanorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoPeter van Heusden avatar Peter van HeusdenAndrea Bagnacani avatar Andrea Bagnacaniorcid logoWendi Bacon avatar Wendi Baconorcid logoNadia Goué avatar Nadia Gouéorcid logoNate Coraor avatar Nate CoraorDonny Vrins avatar Donny VrinsGoodnews Sandy avatar Goodnews Sandyorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAnthony Bretaudeau avatar Anthony BretaudeauAnne Pajon avatar Anne Pajonorcid logoBjörn Grüning avatar Björn Grüningorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoBérénice Batut avatar Bérénice BatutCyril Monjeaud avatar Cyril Monjeaudorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoPhil Reed avatar Phil ReedDilmurat Yusuf avatar Dilmurat Yusuforcid logoMarisa Loach avatar Marisa Loachorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoRand Zoabi avatar Rand Zoabi

Funding

These individuals or organisations provided funding support for the development of this resource