Workflows

These workflows are associated with Galaxy 101 for everyone

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

flowchart TD
  0["Input dataset"];
  1["Convert CSV to tabular"];
  2["Datamash"];
  3["Remove beginning"];
  4["Cut"];
  5["Group"];
  6["Group"];
  7["Scatterplot with ggplot2"];
  8["Scatterplot with ggplot2"];
  9["Unique"];
  0 -->|output| 1;
  1 -->|tabular| 2;
  1 -->|tabular| 3;
  3 -->|out_file1| 4;
  3 -->|out_file1| 5;
  3 -->|out_file1| 6;
  3 -->|out_file1| 7;
  3 -->|out_file1| 8;
  4 -->|out_file1| 9;

	

Importing into Galaxy

Hands-on: Importing a workflow

• Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
• Click on galaxy-upload Import at the top-right of the screen
• Provide your workflow
  • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
  • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
• Click the Import workflow button

Below is a short video demonstrating how to import a workflow from GitHub using this procedure: