Genome annotation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control regions, direct and inverted repeats, insertion sequences, transposons and other mobile elements.
Before diving into this topic, we recommend you to have a look at:
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Genome annotation with Maker
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Genome annotation with Prokka
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You can use a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.
You can also use the following Docker image for these tutorials:
docker run -d -p 8080:80 quay.io/galaxy/genome-annotation-training
It will launch a flavored Galaxy instance available on http://localhost:8080.
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