illumina
Tutorials covering illumina
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data | |||||
| Hybrid genome assembly - Nanopore and Illumina |
Ecology
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Checking expected species and contamination in bacterial isolate |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Bacterial Genome Annotation | |||||
| Identification of AMR genes in an assembled bacterial genome |
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Quality and contamination control in bacterial isolate using Illumina MiSeq Data |
Contributors
This material was contributed to by:
Bazante Sanders
Helena Rasche
Saskia Hiltemann
Grace Hall
Miaomiao Zhou
Paul Zierep
Delphine Lariviere
Wolfgang Maier
Cristóbal Gallardo
Clea Siguret
Deepti Varshney
Teresa Müller
Verena Moosmann
Bérénice Batut
Tristan Reynolds
Björn Grüning
Nate Coraor
Anthony Bretaudeau
Funding
These individuals or organisations provided funding support for the development of this resource
