illumina
Tutorials covering illumina
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data | |||||
| Hybrid genome assembly - Nanopore and Illumina |
Ecology
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Checking expected species and contamination in bacterial isolate |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Bacterial Genome Annotation | |||||
| Identification of AMR genes in an assembled bacterial genome |
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Quality and contamination control in bacterial isolate using Illumina MiSeq Data |
Contributors
This material was contributed to by:
Anthony Bretaudeau
Wolfgang Maier
Paul Zierep
Miaomiao Zhou
Verena Moosmann
Grace Hall
Deepti Varshney
Clea Siguret
Björn Grüning
Teresa Müller
Bérénice Batut
Bazante Sanders
Cristóbal Gallardo
Nate Coraor
Saskia Hiltemann
Helena Rasche
Tristan Reynolds
Delphine Lariviere
Funding
These individuals or organisations provided funding support for the development of this resource
