illumina
Tutorials covering illumina
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data | |||||
| Hybrid genome assembly - Nanopore and Illumina |
Ecology
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Checking expected species and contamination in bacterial isolate |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Bacterial Genome Annotation | |||||
| Identification of AMR genes in an assembled bacterial genome |
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Quality and contamination control in bacterial isolate using Illumina MiSeq Data |
Contributors
This material was contributed to by:
Björn Grüning
Paul Zierep
Grace Hall
Bazante Sanders
Delphine Lariviere
Saskia Hiltemann
Teresa Müller
Anthony Bretaudeau
Tristan Reynolds
Wolfgang Maier
Nate Coraor
Helena Rasche
Verena Moosmann
Clea Siguret
Bérénice Batut
Deepti Varshney
Cristóbal Gallardo
Miaomiao Zhou
Funding
These individuals or organisations provided funding support for the development of this resource
