illumina
Tutorials covering illumina
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data | |||||
| Hybrid genome assembly - Nanopore and Illumina |
Ecology
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Checking expected species and contamination in bacterial isolate |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Bacterial Genome Annotation | |||||
| Identification of AMR genes in an assembled bacterial genome |
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Quality and contamination control in bacterial isolate using Illumina MiSeq Data |
Contributors
This material was contributed to by:
Helena Rasche
Wolfgang Maier
Cristóbal Gallardo
Bazante Sanders
Björn Grüning
Saskia Hiltemann
Anthony Bretaudeau
Clea Siguret
Grace Hall
Paul Zierep
Verena Moosmann
Nate Coraor
Delphine Lariviere
Bérénice Batut
Teresa Müller
Miaomiao Zhou
Deepti Varshney
Tristan Reynolds
Funding
These individuals or organisations provided funding support for the development of this resource
