illumina
Tutorials covering illumina
Material
You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.Assembly
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data | |||||
| Hybrid genome assembly - Nanopore and Illumina |
Ecology
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Checking expected species and contamination in bacterial isolate |
Genome Annotation
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Bacterial Genome Annotation | |||||
| Identification of AMR genes in an assembled bacterial genome |
Sequence analysis
| Lesson | Slides | Hands-on | Recordings | Input dataset | Workflows |
|---|---|---|---|---|---|
| Quality and contamination control in bacterial isolate using Illumina MiSeq Data |
Contributors
This material was contributed to by:
Helena Rasche
Bérénice Batut
Miaomiao Zhou
Paul Zierep
Bazante Sanders
Deepti Varshney
Delphine Lariviere
Grace Hall
Wolfgang Maier
Clea Siguret
Verena Moosmann
Tristan Reynolds
Teresa Müller
Saskia Hiltemann
Björn Grüning
Nate Coraor
Anthony Bretaudeau
Cristóbal Gallardo
Funding
These individuals or organisations provided funding support for the development of this resource
