metabolomics

Tutorials covering metabolomics

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Metabolomics

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Metabolomics
Mass spectrometry imaging: Examining the spatial distribution of analytes
metabolomics mass spectrometry imaging imaging
Mass spectrometry imaging: Examining the spatial distribution of analytes
metabolomics mass spectrometry imaging imaging
Mass spectrometry imaging: Finding differential analytes
metabolomics mass spectrometry imaging imaging
Mass spectrometry imaging: Finding differential analytes
metabolomics mass spectrometry imaging imaging
Mass spectrometry: GC-MS analysis with the metaMS package
metabolomics exposomics gc-ms
Mass spectrometry: GC-MS analysis with the metaMS package
metabolomics exposomics gc-ms
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
metabolomics exposomics gc-ms
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
metabolomics exposomics gc-ms
Mass spectrometry: LC-MS analysis
metabolomics lc-ms
Mass spectrometry: LC-MS analysis
metabolomics lc-ms
Mass spectrometry: LC-MS data processing
metabolomics lc-ms
Mass spectrometry: LC-MS data processing
metabolomics lc-ms
Mass spectrometry: LC-MS preprocessing with XCMS
metabolomics lc-ms
Mass spectrometry: LC-MS preprocessing with XCMS
metabolomics lc-ms
Molecular formula assignment and mass recalibration with MFAssignR package
metabolomics exposomics lc-ms gc-ms
Molecular formula assignment and mass recalibration with MFAssignR package
metabolomics exposomics lc-ms gc-ms
Predicting EI+ mass spectra with QCxMS
metabolomics exposomics gc-ms computational-chemistry quantum-chemistry
Predicting EI+ mass spectra with QCxMS
metabolomics exposomics gc-ms computational-chemistry quantum-chemistry

Proteomics

Lesson Slides Hands-on Recordings Input dataset Workflows
Multiomics data analysis using MultiGSEA
multi-omics transcriptomics proteomics metabolomics

Contributors

This material was contributed to by:

orcid logoMaxim Skoryk avatar Maxim Skorykorcid logoMatej Troják avatar Matej Trojákorcid logoCristóbal Gallardo avatar Cristóbal GallardoWorkflow4Metabolomics core team avatar Workflow4Metabolomics core teamJulien Saint-Vanne avatar Julien Saint-Vanneorcid logoKristina Gomoryova avatar Kristina GomoryovaThorben Stehling avatar Thorben StehlingMélanie Pétéra avatar Mélanie Pétéraorcid logoPavankumar Videm avatar Pavankumar VidemSimeon Schum avatar Simeon SchumMaren Stillger avatar Maren StillgerJean-François Martin avatar Jean-François MartinRalf Weber avatar Ralf Weberorcid logoCécile Canlet avatar Cécile Canletorcid logoBérénice Batut avatar Bérénice Batutorcid logoYann Guitton avatar Yann Guittonorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMelanie Föll avatar Melanie FöllGildas Le Corguillé avatar Gildas Le Corguilléorcid logoMatthias Bernt avatar Matthias Berntorcid logoHelena Rasche avatar Helena Rascheorcid logoBjörn Grüning avatar Björn Grüningorcid logoJulia Jakiela avatar Julia Jakielaorcid logoHelge Hecht avatar Helge HechtSimon Bray avatar Simon Bray

Funding

These individuals or organisations provided funding support for the development of this resource

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UFR
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ELIXIR Europe
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MetaboHUB
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RFMF