Workflows

These workflows are associated with Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

Workflow Updated Import Has Tests Tested License Creators
main_workflow.ga Jul 14, 2023 Launch in Tutorial Mode What is tutorial mode?
Import to UseGalaxy.eu
Import to UseGalaxy.org
Import to UseGalaxy.org.au
Import to another server (≥23.0+ only!) 		✅ ❌ MIT RECETOX

Importing into Galaxy

Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!
Hands-on: Importing a workflow
  • Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
  • Click on Import at the top-right of the screen
  • Provide your workflow
    • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
    • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
  • Click the Import workflow button