DDA

Tutorials covering DDA

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Proteomics

Lesson Slides Hands-on Recordings Input dataset Workflows
Annotating a protein list identified by LC-MS/MS experiments
DDA human
Biomarker candidate identification
DDA human
Label-free data analysis using MaxQuant
DDA label-free
Label-free versus Labelled - How to Choose Your Quantitation Method
DDA
MaxQuant and MSstats for the analysis of TMT data
DDA TMT
Peptide and Protein ID using OpenMS tools
DDA HeLa
Peptide and Protein ID using SearchGUI and PeptideShaker
DDA HeLa
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
DDA SILAC
Protein FASTA Database Handling
DDA

Contributors

This material was contributed to by:

Niall Beard avatar Niall BeardFlorian Christoph Sigloch avatar Florian Christoph SiglochWilliam Durand avatar William Durandorcid logoHelena Rasche avatar Helena Rascheorcid logoMelanie Föll avatar Melanie Föllorcid logoBérénice Batut avatar Bérénice Batutorcid logoNicola Soranzo avatar Nicola SoranzoYves Vandenbrouck avatar Yves Vandenbrouckorcid logoBjörn Grüning avatar Björn Grüningorcid logoMartin Čech avatar Martin ČechKlemens Fröhlich avatar Klemens Fröhlichorcid logoMatthias Fahrner avatar Matthias Fahrnerorcid logoClemens Blank avatar Clemens Blankorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoSubina Mehta avatar Subina Mehtaorcid logoArmin Dadras avatar Armin DadrasDavid Christiany avatar David ChristianyFlorence Combes avatar Florence CombesValentin Loux avatar Valentin Loux

Funding

These individuals or organisations provided funding support for the development of this resource

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de.NBI
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ELIXIR Europe
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UFR