nanopore

Tutorials covering nanopore

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Assembly

Lesson	Slides	Hands-on	Recordings	Input dataset	Workflows
Chloroplast genome assembly plants nanopore jbrowse1 biodiversity tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages video video Tutorial (September 2024) - 16m video Tutorial (February 2021) - 35m video View All		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages	video video Tutorial (September 2024) - 16m video Tutorial (February 2021) - 35m video View All
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data) nanopore assembly amr microgalaxy tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages
Large genome assembly and polishing assembly polishing nanopore plants biodiversity tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages video video Tutorial (May 2023) - 25m video View All		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages	video video Tutorial (May 2023) - 25m video View All

Microbiome

Lesson	Slides	Hands-on	Recordings	Input dataset	Workflows
16S Microbial analysis with Nanopore data metabarcoding 16S nanopore microgalaxy plants tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages
Antibiotic resistance detection nanopore plasmids assembly amr microgalaxy tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages video video Tutorial (February 2021) - 45m video View All		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages	video video Tutorial (February 2021) - 45m video View All
Identification of the micro-organisms in a beer using Nanopore sequencing nanopore beer citizen science metagenomics microgalaxy tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages video video Tutorial (May 2023) - 1h5m video View All		tutorial Toggle Dropdown Automatic translations Deutsch Español 中文 Français 日本語 Português العربية More Languages	video video Tutorial (May 2023) - 1h5m video View All

Contributors

This material was contributed to by:

Anthony Bretaudeau

Polina Polunina

Bazante Sanders

Bérénice Batut

Nuwan Goonasekera

Björn Grüning

Willem de Koning

Cristóbal Gallardo

Saskia Hiltemann

Funding

These individuals or organisations provided funding support for the development of this resource

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.