nanopore

Tutorials covering nanopore

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Assembly

Lesson Slides Hands-on Recordings Input dataset Workflows
Chloroplast genome assembly
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
Large genome assembly and polishing

Microbiome

Lesson Slides Hands-on Recordings Input dataset Workflows
16S Microbial analysis with Nanopore data
Antibiotic resistance detection
Identification of the micro-organisms in a beer using Nanopore sequencing

Contributors

This material was contributed to by:

orcid logoBjörn Grüning avatar Björn GrüningNuwan Goonasekera avatar Nuwan GoonasekeraMatúš Kalaš avatar Matúš Kalašorcid logoTeresa Müller avatar Teresa MüllerBazante Sanders avatar Bazante Sandersorcid logoAnna Syme avatar Anna Symeorcid logoMiaomiao Zhou avatar Miaomiao Zhouorcid logoPolina Polunina avatar Polina Poluninaorcid logoAnthony Bretaudeau avatar Anthony BretaudeauSiyu Chen avatar Siyu Chenorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoHelena Rasche avatar Helena Rascheorcid logoBérénice Batut avatar Bérénice Batutorcid logoCristóbal Gallardo avatar Cristóbal GallardoWillem de Koning avatar Willem de Koning

Funding

These individuals or organisations provided funding support for the development of this resource