Tutorials using upload1

Servers Offering this Tool

UseGalaxy.eu (upload1)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

• upload1

• Assembly / Hands-on: Hands-on: Chloroplast genome assembly
• Assembly / Hands-on: Hands-on: Making sense of a newly assembled genome
• Assembly / Hands-on: Hands-on: Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• Assembly / Hands-on: Hands-on: Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• Contributing to the Galaxy Training Material / Hands-on: Hands-on: Creating content in Markdown
• Ecology / Hands-on: Hands-on: Checking expected species and contamination in bacterial isolate
• Evolution / Hands-on: Hands-on: Tree thinking for tuberculosis evolution and epidemiology
• Evolution / Hands-on: Hands-on: Identifying tuberculosis transmission links: from SNPs to transmission clusters
• Using Galaxy and Managing your Data / Hands-on: Hands-on: Workflow Reports
• Genome Annotation / Hands-on: Hands-on: Identification of AMR genes in an assembled bacterial genome
• Genome Annotation / Hands-on: Hands-on: Bacterial Genome Annotation
• Introduction to Galaxy Analyses / Hands-on: Hands-on: Data Manipulation Olympics
• Introduction to Galaxy Analyses / Hands-on: Hands-on: Galaxy 101
• Introduction to Galaxy Analyses / Hands-on: Hands-on: Galaxy 101 for everyone
• Introduction to Galaxy Analyses / Hands-on: Hands-on: From peaks to genes
• Introduction to Galaxy Analyses / Hands-on: Hands-on: How to reproduce published Galaxy analyses
• Variant Analysis / Hands-on: Hands-on: Avian influenza viral strain analysis from gene segment sequencing data
• Variant Analysis / Hands-on: Hands-on: Pox virus genome analysis from tiled-amplicon sequencing data
• Variant Analysis / Hands-on: Hands-on: Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
• Variant Analysis / Hands-on: Hands-on: M. tuberculosis Variant Analysis
• Visualisation / Hands-on: Hands-on: Visualisation with Circos