Tutorials using iuc/anndata_inspect

Servers Offering this Tool

UseGalaxy.eu (0.7.5+galaxy1)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

• 0.7.5+galaxy1
• 0.10.3+galaxy0

• Single Cell / Hands-on: Hands-on: Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• Single Cell / Hands-on: Hands-on: Pre-processing of 10X Single-Cell ATAC-seq Datasets
• Single Cell / Hands-on: Hands-on: Hands-on: Hands-on: Combining single cell datasets after pre-processing
• Single Cell / Hands-on: Hands-on: Hands-on: Hands-on: Filter, plot and explore single-cell RNA-seq data (Scanpy)
• Single Cell / Hands-on: Hands-on: Removing the effects of the cell cycle
• Single Cell / Hands-on: Hands-on: Inferring single cell trajectories (Monocle3)
• Single Cell / Hands-on: Hands-on: Converting between common single cell data formats
• Single Cell / Hands-on: Hands-on: Converting NCBI Data to the AnnData Format
• Single Cell / Hands-on: Hands-on: Clustering 3K PBMCs with Scanpy