JBrowse: genome browser
toolshed.g2.bx.psu.edu/repos/iuc/jbrowse/jbrowse/1.16.9+galaxy01.16.9+galaxy0
Metadata
Servers Offering this Tool
UseGalaxy.eu (1.16.9+galaxy0)This is a guess, we are not currently checking if that is actually present.
Observed Tool Versions
Within GTN tutorials
- 1.16.9+galaxy0
- 1.16.8+galaxy1
- 1.16.4+galaxy3
- 1.16.11+galaxy1
- 1.16.11+galaxy0
- 1.16.10+galaxy0
- 1.16.1+galaxy0
- 0.7.0.3
EDAM Operations
EDAM Topics
Relevant Tutorials
- Assembly / Chloroplast genome assembly
- Assembly / Making sense of a newly assembled genome
- Genome Annotation / Identification of AMR genes in an assembled bacterial genome
- Genome Annotation / Genome annotation with Maker
- Genome Annotation / Genome annotation with Maker (short)
- Genome Annotation / Genome annotation with Prokka
- Genome Annotation / Refining Genome Annotations with Apollo (prokaryotes)
- Genome Annotation / Refining Genome Annotations with Apollo (eukaryotes)
- Genome Annotation / Bacterial Genome Annotation
- Genome Annotation / Genome annotation with Funannotate
- Genome Annotation / Genome annotation with Helixer
- Sequence analysis / Mapping
- Sequence analysis / SARS-CoV-2 Viral Sample Alignment and Variant Visualization
- Variant Analysis / Microbial Variant Calling
- Variant Analysis / M. tuberculosis Variant Analysis
- Visualisation / Genomic Data Visualisation with JBrowse