Tutorials using iuc/fastp

Servers Offering this Tool

UseGalaxy.eu (0.23.2+galaxy0)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

• 0.23.2+galaxy0
• 0.20.1+galaxy0
• 0.19.5+galaxy1

• Assembly / Hands-on: Hands-on: Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• Assembly / Hands-on: Hands-on: Large genome assembly and polishing
• Assembly / Hands-on: Hands-on: Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• Assembly / Hands-on: Hands-on: Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• Introduction to Galaxy Analyses / Hands-on: Hands-on: NGS data logistics
• Introduction to Galaxy Analyses / Hands-on: Hands-on: Very Short Introductions: QC
• Microbiome / Hands-on: Hands-on: Identification of the micro-organisms in a beer using Nanopore sequencing
• Microbiome / Hands-on: Hands-on: 16S Microbial analysis with Nanopore data
• Microbiome / Hands-on: Hands-on: Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• Transcriptomics / Hands-on: Hands-on: Genome-wide alternative splicing analysis
• Variant Analysis / Hands-on: Hands-on: Avian influenza viral strain analysis from gene segment sequencing data
• Variant Analysis / Hands-on: Hands-on: Pox virus genome analysis from tiled-amplicon sequencing data
• Variant Analysis / Hands-on: Hands-on: From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis