Automatically trim adapters (without providing custom sequences)

There are many tools for this: Trimmomatic, Trim Galore, and a few others (search: “Trim”). In some of these there are options to automatically trim adaptors, but they are not so specific to the sequence you are working on necessarily.

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{% snippet  topics/epigenetics/tutorials/atac-seq/faqs/adapter_trimming.md %}

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