Assembly

Lesson Slides Hands-on Recordings Input dataset Workflows
Chloroplast genome assembly
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
Hybrid genome assembly - Nanopore and Illumina
Large genome assembly and polishing

Microbiome

Lesson Slides Hands-on Recordings Input dataset Workflows
16S Microbial analysis with Nanopore data
Antibiotic resistance detection
Identification of the micro-organisms in a beer using Nanopore sequencing