Conversion

Tutorials covering Conversion

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Imaging

Lesson Slides Hands-on Recordings Input dataset Workflows
Execute a BiaPy workflow in Galaxy
Image segmentation Image annotation Deep learning Conversion Overlay 3D image Volume rendering
Introduction to Image Analysis using Galaxy
Image segmentation Image thresholding Conversion Object counting Overlay Fluorescence microscopy
Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools
ROI selection Conversion Object feature extraction Multi-channel image
Segmentation of Anatomical Structures in Medical 3-D Images
Image segmentation Conversion Overlay Object feature extraction Medical imaging Computed tomography 3D image Volume rendering

Contributors

This material was contributed to by:

orcid logoBjörn Grüning avatar Björn Grüningorcid logoThomas Wollmann avatar Thomas Wollmannorcid logoRiccardo Massei avatar Riccardo MasseiMaria Arrate Munoz Barrutia avatar Maria Arrate Munoz Barrutiaorcid logoHelena Rasche avatar Helena Rascheorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoLeonid Kostrykin avatar Leonid Kostrykinorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoReyhaneh Tavakoli-Koopaei avatar Reyhaneh Tavakoli-KoopaeiDaniel Franco Barranco avatar Daniel Franco Barrancoorcid logoDiana Chiang Jurado avatar Diana Chiang Jurado

Funding

These individuals or organisations provided funding support for the development of this resource

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ELIXIR Europe
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de.NBI