Anna Syme

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Tutorials

• Assembly / Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data 🧐
• Assembly / Chloroplast genome assembly ✍️ 🧐
• Assembly / Large genome assembly and polishing ✍️ 🧐
• Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step ✍️ 🧐
• Assembly / An Introduction to Genome Assembly 🧐
• Variant Analysis / Microbial Variant Calling ✍️
• Genome Annotation / Genome annotation with Prokka ✍️ 🧐
• Introduction to Galaxy Analyses / A short introduction to Galaxy ✍️
• Introduction to Galaxy Analyses / Breve introducción a Galaxy - en español ✍️

Slides

• Genome Annotation / Genome annotation with Prokka ✍️ 🧐

FAQs

• Why does my assembly graph in Bandage look different to the one pictured in the tutorial?
• Most tools seem to have options for assembly using long and short reads, what are the pros and cons of the different tools?
• Running more than one round of Pilon polishing
• Can we polish the assembly with long reads too?

Video Recordings

• Assembly / Chloroplast genome assembly 💬 🗣
• Assembly / Large genome assembly and polishing 💬 🗣

Events

• Galaxy Training Academy 2024 🎪 🧑‍🏫

GitHub Activity

github Issues Reported

News

External Links

Favourite Topics

Favourite Formats