Galaxy at SURF Research Cloud workshop
In-person course
Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
During the workshop, you will see a short demo and get a chance to test the catalog item yourself. This will be followed by a discussion about your needs as Galaxy researchers, helping us work toward a better future for the Dutch research community. We will conclude the day with drinks and networking with fellow Galaxy NL users.
Who is this course for?
This event is targeted towards researchers in the Netherlands who already have experience working with Galaxy.Organisers & Instructors
This event is brought to you by:
| Organisers(s) |
Mirela Minkova
|
| Instructor(s) |
Mirela Minkova
Yuliia Orlova
|
Before you start
Before starting the course, make sure to follow the setup instructions
Galaxy & Pulsar on SURF
During the workshop, you will see a short demo and get a chance to test the catalog item yourself.
| Time | Lesson | Slides | Hands-on | Recordings |
|---|---|---|---|---|
13:00 - 13:40 |
SURF SRC introduction |
|||
13:40 - 14:10 |
Galaxy usage on SURF Research Cloud | |||
14:10 - 14:40 |
Pulsar usage on SURF Research Cloud | |||
14:40 |
Coffee Break |
|||
14:40 - 15:40 |
Mapping
|
|||
15:40 - 16:10 |
An Introduction to Genome Assembly
|
|||
16:10 |
General feedback from participants |
|||
16:30 - 17:00 |
Borreltje |
|||
Get set up for the course!
Follow the steps below to get set up with everything you need to participate in the course!
Prepare for the Course
Before joining the course, please make sure to:
- Bring a laptop with at least 8GB of RAM.
- Do the Intro to Galaxy tutorial if you are not yet familiar with Galaxy
- Up-to-date browser
- Experience in using SURF Research Cloud
Instructor Zone
Check out our checklists for
- Organising a Workshop to check that you haven't forgotten any important step.
- Running a Workshop, helpful reminders closer to your event.
Request TIaaS
Training Infrastructure as a Service (TIaaS) is a service that allows you to request space for your course on a server, it helps ensure courses run smoothly by separating your trainee's jobs into a separate queue. Learn more about TIaaS in our tutorial.
The following links will open a (mostly) pre-filled out TIaaS form,
Once you receive a URL from the admins, please set it as a tiaas_link in your event metadata.
Add your event to the Galaxy Hub Event Horizon
To also list your event on the Galaxy Event Horizon, copy the text below, and add your event to the Galaxy Hub GitHub Repo. Create a folder for your event here, and add an index.md file with the following contents:
---
title: "Galaxy at SURF Research Cloud workshop"
date: '2025-01-28'
days: 1
tease: Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
#continent: EU
location: "SURF Amsterdam,Amsterdam"
external_url: "https://training.galaxyproject.org/training-material/events/2025-01-28-src.html"
gtn: true
contact: "mirela.minkova@surf.nl"
subsites: [all]
---
Promote the Event
Tootable/Tweetable version:
Galaxy at SURF Research Cloud workshop! 📢
Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
📅 January 28, 2025
➡️ https://training.galaxyproject.org/training-material/events/2025-01-28-src.html
Slack-compatible version:
Galaxy at SURF Research Cloud workshop! 📢
Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
:calendar: January 28, 2025
:arrow_right: https://training.galaxyproject.org/training-material/events/2025-01-28-src.html
Version with schedule:
Galaxy at SURF Research Cloud workshop! 📢
Half-day workshop demonstrating the local Galaxy instance built for users of SURF Research Cloud.
**Agenda**:
- Galaxy & Pulsar on SURF
📅 January 28, 2025
➡️ https://training.galaxyproject.org/training-material/events/2025-01-28-src.html
Event details
| event-date | January 28, 2025 |
| event-location | SURF Amsterdam, Science Park 140, Amsterdam, The Netherlands, 1098 XG |
| event-cost | free |
| mirela.minkova@surf.nl |
Add this event to your calendar Google Outlook Office 365
Organisers
Mirela Minkova
Instructors
Mirela Minkova
Yuliia Orlova
In collaboration with
SURF