Falco: An alternative, more performant implementation of FastQC for high throughput sequence quality control

Metadata

Links

• bio.tools: Falco

EDAM Operations

• Read mapping
• Visualisation
• Sequencing quality control

EDAM Topics

• Imaging
• Workflows
• Mapping

Observed Tool Versions

Within GTN tutorials

1.2.4+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org.au ⭐️

Relevant Tutorials

• Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• Ecology / Data submission using ENA upload Tool
• Epigenetics / CUT&RUN data analysis
• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• Transcriptomics / Reference-based RNA-Seq data analysis
• Variant Analysis / Somatic Variant Discovery from WES Data Using Control-FREEC
• Variant Analysis / Identification of somatic and germline variants from tumor and normal sample pairs