Add genome and annotations to IGV from Galaxy
Authors: 
    Delphine Lariviere
    Bérénice Batut
    Helena Rasche
    Saskia Hiltemannhall-of-fameAdd Contributions!
    - Upload a FASTA file with the reference genome and a GFF3 file with its annotation in the history (if not already there)
 - Install IGV (if not already installed)
 - Launch IGV on your computer
 - Expand the FASTA dataset with the genome in the history
 - Click on the 
localindisplay with IGVto load the genome into the IGV browser - Wait until all Dataset status are 
ok - 
    
Close the window
An alert
ERROR Parameter "file" is requiredmay appear. Ignore it. - Expand the GFF3 dataset with the annotations of the genome in the history
 - Click on the 
localindisplay with IGVto load the annotation into the IGV browser - 
    
Switch to the IGV instance
The annotation track should appear. Be careful that all files have the same genome ID
 
Persistent URL
Resource purlPURL: https://gxy.io/GTN:F00231Still have questions?
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