Workflows
These workflows are associated with Large genome assembly and polishing
| Workflow | Updated | Version | License | Tests | Reports | Comments |
|---|---|---|---|---|---|---|
| Assembly polishing - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Assembly with Flye - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Assess genome quality - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Combined workflows for large genome assembly - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Data QC - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Racon polish with Illumina reads (R1 only), x2 - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ❌ | ❌ |
| Racon polish with long reads, x4 - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| Trim and filter reads - fastp - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |
| kmer counting - meryl - upgraded | May 8, 2024 | 2 | GPL-3.0-or-later | ❌ | ✅ | ❌ |