Pratik Jagtap
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
- Topic: Proteomics
Tutorials
- Proteomics / metaQuantome 3: Taxonomy ✍️
- Proteomics / EncyclopeDIA ✍️
- Proteomics / Neoantigen 4: Variant Annotation 📝 🧐
- Proteomics / Neoantigen 3: PepQuery2 Verification 📝 🧐
- Proteomics / metaQuantome 1: Data creation ✍️
- Proteomics / Neoantigen 2: Database merge and FragPipe discovery 📝 🧐
- Proteomics / Neoantigen 5b: IEDB binding Validated Neopeptides 📝 🧐
- Proteomics / Proteogenomics 3: Novel peptide analysis ✍️
- Proteomics / Clinical Metaproteomics 1: Database-Generation 📝 🧐
- Proteomics / Neoantigen 5a: Predicting HLA Binding 📝 🧐
- Proteomics / Clinical Metaproteomics 5: Data Interpretation 📝
- Proteomics / metaQuantome 2: Function ✍️
- Proteomics / Proteogenomics 1: Database Creation ✍️
- Proteomics / Clinical Metaproteomics 2: Discovery 📝
- Proteomics / Clinical Metaproteomics 4: Quantitation 📝
- Proteomics / Proteogenomics 2: Database Search ✍️
- Proteomics / Neoantigen 1a: Fusion-Database-Generation 📝 🧐
- Proteomics / Clinical Metaproteomics 3: Verification 📝
- Proteomics / Metaproteomics tutorial ✍️ 🧐
- Proteomics / Neoantigen 1b: Non-Reference-Database-Generation 📝 🧐
- Microbiome / Metatranscriptomics analysis using microbiome RNA-seq data ✍️
- Microbiome / Metatranscriptomics analysis using microbiome RNA-seq data (short) ✍️
Slides
Video Recordings
- Proteomics / Metaproteomics tutorial 🗣
- Microbiome / Metatranscriptomics analysis using microbiome RNA-seq data 🗣
- Microbiome / Metatranscriptomics analysis using microbiome RNA-seq data (short) 🗣
Events
GitHub Activity github Issues Reported
External Links
Favourite Topics
Favourite Formats