Verena Moosmann

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Tutorials

• Sequence analysis / Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes ✍️ 🧐
• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data 📝
• Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data 📝
• Variant Analysis / Somatic Variant Discovery from WES Data Using Control-FREEC 📝 🧐
• Variant Analysis / Identification of somatic and germline variants from tumor and normal sample pairs 📝
• Ecology / Data submission using ENA upload Tool 📝
• Ecology / RAD-Seq de-novo data analysis 📝
• Ecology / RAD-Seq Reference-based data analysis 📝

GitHub Activity

github Issues Reported

9 Merged Pull Requests

See all of the github Pull Requests and github Commits by Verena Moosmann.

• Change from FastQC to Falco in the tutorials quality-contamination-control and mrsa-illumina
  assembly
  sequence-analysis
• Change from fastqc to falco in somatic-variant-discovery tutorial
  variant-analysis
• Add myself as contributor in ref-based-rad-seq tutorial
  ecology
• Change to latest MAFFT version in viral-primer-design tutorial
  sequence-analysis
• Change from fastqc to falco in somatic-variants tutorial
  variant-analysis

Reviewed 2 PRs

We love our community reviewing each other's work!

• Change from fastqc to falco in somatic-variant-discovery tutorial
  variant-analysis
• Add training on designing viral primer schemes with MAFFT and VarVamp
  template-and-tools
  sequence-analysis

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