Upload datasets from GenomeArk

  1. Open the file galaxy-upload upload menu
  2. Click on Choose remote files tab
  3. Click on the Genome Ark button and then click on species

You can find the data by following this path: /species/${Genus}_${species}/${specimen_code}/genomic_data. Inside a given datatype directory (e.g. pacbio), select all the relevant files individually until all the desired files are highlighted and click the Ok button. Note that there may be multiple pages of files listed. Also note that you may not want every file listed.

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