:
toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/9.5+galaxy2
Metadata
Links
Observed Tool Versions
Within GTN tutorials
9.5+galaxy2
9.5+galaxy0
9.3+galaxy0
Relevant Tutorials
- Assembly / Making sense of a newly assembled genome
- Genome Annotation / Bacterial Genome Annotation
- Introduction to Galaxy Analyses / From peaks to genes
- Microbiome / Building an amplicon sequence variant (ASV) table from 16S data using DADA2
- Microbiome / Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
- Microbiome / Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
- Proteomics / MaxQuant and MSstats for the analysis of label-free data
- Proteomics / metaQuantome 1: Data creation
- Proteomics / Proteogenomics 1: Database Creation
- Single Cell / Pseudobulk Analysis with Decoupler and EdgeR
- Single Cell / Combining single cell datasets after pre-processing
- Single Cell / Converting NCBI Data to the AnnData Format
- Statistics and machine learning / Identifing Survival Markers of Brain tumor with Flexynesis
- Variant Analysis / Deciphering Virus Populations - Single Nucleotide Variants (SNVs) and Specificities in Baculovirus Isolates