Construct Expression Set Object: Create an ExpressionSet object from tabular and textual data

Metadata

Links

• bio.tools: MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC

EDAM Operations

• Design
• Protein property calculation
• Variant effect prediction

EDAM Topics

• Genetic variation
• Computational biology
• Protein properties
• Protein folding, stability and design
• Bioengineering

Observed Tool Versions

Within GTN tutorials

0.1.1+galaxy4

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

0.1.1+galaxy3

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

0.1.1+galaxy0

• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• UseGalaxy.cz

Relevant Tutorials

• Single Cell / Evaluating Reference Data for Bulk RNA Deconvolution
• Single Cell / Bulk RNA Deconvolution with MuSiC
• Single Cell / Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• Single Cell / Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution