Workflows

These workflows are associated with Creating, Editing and Importing Galaxy Workflows

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

flowchart TD
  0["ℹ️ Input Collection\nInput dataset collection"];
  style 0 stroke:#2c3143,stroke-width:4px;
  1["Reverse dataset"];
  0 -->|output| 1;
  2["Select first lines"];
  1 -->|outfile| 2;
  daf1abd9-a5c8-4b25-add1-5475e594f187["Output\nFirst lines"];
  2 --> daf1abd9-a5c8-4b25-add1-5475e594f187;
  style daf1abd9-a5c8-4b25-add1-5475e594f187 stroke:#2c3143,stroke-width:4px;
	

flowchart TD
  0["ℹ️ Input Collection\nInput dataset collection"];
  style 0 stroke:#2c3143,stroke-width:4px;
  1["🛠️ Subworkflow\nworkflow 1"];
  style 1 fill:#edd,stroke:#900,stroke-width:4px;
  0 -->|output| 1;
  88160926-01a6-4903-8737-1f3d65449e12["Output\nFirst lines"];
  1 --> 88160926-01a6-4903-8737-1f3d65449e12;
  style 88160926-01a6-4903-8737-1f3d65449e12 stroke:#2c3143,stroke-width:4px;
  2["🛠️ Subworkflow\nworkflow 2"];
  style 2 fill:#edd,stroke:#900,stroke-width:4px;
  0 -->|output| 2;
  f18ca9d2-a8bb-4317-86cb-bad2ef3d2fba["Output\nFirst lines"];
  2 --> f18ca9d2-a8bb-4317-86cb-bad2ef3d2fba;
  style f18ca9d2-a8bb-4317-86cb-bad2ef3d2fba stroke:#2c3143,stroke-width:4px;
  3["Paste"];
  1 -->|First lines| 3;
  2 -->|First lines| 3;
	

Importing into Galaxy

Hands-on: Importing a workflow

• Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
• Click on galaxy-upload Import at the top-right of the screen
• Provide your workflow
  • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
  • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
• Click the Import workflow button

Below is a short video demonstrating how to import a workflow from GitHub using this procedure: