Debugging tool errors

Tool stdout/stderr is available in UI under “i” icon on history dataset

1. Set cleanup_job to onsuccess
2. Cause a job failure
3. Go to job working directory (find in logs or /data/jobs/<hash>/<job_id>)
4. Poke around, try running things (srun --pty bash considered useful)

Familiarize yourself with the places Galaxy keeps things

Still have questions?

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