Katarzyna Kamieniecka

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• FAIR Data, Workflows, and Research
• FAIR Data Management

Tutorials

• Computational chemistry / Data management in Medicinal Chemistry ✍️
• Epigenetics / Infinium Human Methylation BeadChip ✍️ 🧐
• FAIR Data, Workflows, and Research / FAIR in a nutshell ✍️ 🧐
• FAIR Data, Workflows, and Research / Metadata ✍️
• FAIR Data, Workflows, and Research / Data Registration ✍️
• FAIR Data, Workflows, and Research / Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub ✍️ 🧐
• FAIR Data, Workflows, and Research / Sequence data submission to ENA 📝
• FAIR Data, Workflows, and Research / FAIR data management solutions ✍️ 🧐
• FAIR Data, Workflows, and Research / FAIRification of an RNAseq dataset ✍️
• FAIR Data, Workflows, and Research / Access ✍️
• FAIR Data, Workflows, and Research / REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data ✍️ 🧐
• FAIR Data, Workflows, and Research / FAIR Galaxy Training Material ✍️ 🧐
• FAIR Data, Workflows, and Research / Making clinical datasets FAIR 📝
• FAIR Data, Workflows, and Research / FAIR Bioimage Metadata ✍️
• FAIR Data, Workflows, and Research / FAIR and its Origins ✍️
• FAIR Data, Workflows, and Research / Persistent Identifiers ✍️
• Variant Analysis / Working with Beacon V2: A Comprehensive Guide to Creating, Uploading, and Searching for Variants with Beacons ✍️
• Variant Analysis / Querying the University of Bradford GDC Beacon Database for Copy Number Variants (CNVs) ✍️
• Variant Analysis / Somatic Variant Discovery from WES Data Using Control-FREEC ✍️ 🧐

Slides

• Single Cell / Single-cell Formats and Resources ✍️
• Epigenetics / EWAS Epigenome-Wide Association Studies Introduction ✍️ 🧐

Video Recordings

• FAIR Data, Workflows, and Research / Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub 💬

GitHub Activity

github Issues Reported

7 Merged Pull Requests

See all of the github Pull Requests and github Commits by Katarzyna Kamieniecka.

• New Training: Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
  template-and-tools
  fair
• add authorship to FAIR lessons
  fair
• NEW LESSON ENA sequence submission #4447
  template-and-tools
  fair
• fix broken PR
  template-and-tools
  fair
• Cross-post FAIR lessons
  contributing
  imaging

Reviewed 4 PRs

We love our community reviewing each other's work!

• New Training: Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
  template-and-tools
  fair
• Bioimaging tutorial typo fixed
  fair
• Add news post about fair training
  template-and-tools
  news
• Expand the FAIR Training Topic
  variant-analysis
  template-and-tools
  epigenetics

News

External Links

Favourite Topics

Favourite Formats