Scanpy remove confounders: with scanpy

Metadata

Links

• bio.tools:

EDAM Operations

• Differential gene expression profiling

EDAM Topics

• Cell biology
• Gene expression
• Genetics

Observed Tool Versions

Within GTN tutorials

1.11.5+galaxy0

• UseGalaxy.org.au ⭐️
• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.be
• UseGalaxy.cz

1.10.2+galaxy0

• UseGalaxy.org.au ⭐️
• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.be
• UseGalaxy.cz

1.7.1+galaxy0

• UseGalaxy.org.au ⭐️
• UseGalaxy.eu ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.be
• UseGalaxy.cz
• UseGalaxy.no

Relevant Tutorials

• Single Cell / Analysis of plant scRNA-Seq Data with Scanpy
• Single Cell / Clustering 3K PBMCs with Scanpy
• Single Cell / Batch Correction and Integration with Seurat or Scanpy