These workflows are associated with Pre-processing of 10X Single-Cell RNA Datasets

To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.

Workflow Updated Import Has Tests Tested License Creators May 18, 2023 Launch in Tutorial Mode What is tutorial mode?
Import to
Import to
Import to
Import to another server (≥23.0+ only!)
CC-BY-4.0 Wendi Bacon Pavankumar Videm Mehmet Tekman Hans-Rudolf Hotz Daniel Blankenberg

Importing into Galaxy

Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!
Hands-on: Importing a workflow
  • Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
  • Click on galaxy-upload Import at the top-right of the screen
  • Provide your workflow
    • Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
    • Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
  • Click the Import workflow button