Phylogenetics tutorial takes researchers back to basics!

Author(s) Melissa Burke avatar Melissa Burke
Phylogenetics Tutorial GTN Australian BioCommons

Posted on: 13 June 2024 purlPURL: https://gxy.io/GTN:N00088

A new Galaxy Training Network tutorial has been created to take researchers back to basics to uncover the principles of phylogenetics and how tree-building methods work. A longstanding collaboration between Professor Michael Charleston from the University of Tasmania and Australian BioCommons has delivered this self-guided tutorial featuring videos and hands-on exercises. To maximise its impact, the resource was tailored specifically to be shared globally via the Galaxy Training Network, and will form the basis of an upcoming live training workshop.

Using real-life data, tools available in Galaxy and SplitsTree, the tutorial demonstrates the principles behind a variety of methods used to estimate phylogenetic trees from aligned sequence data or distance data. With a conversational style Michael discusses why phylogenetics is important, unpicks phylogenetics terminology from the roots to the tips and explains concepts such as multiple sequence alignment, how alignments are used to build trees, and phylogenetic networks.

Try out the Phylogenetics: back to basics tutorial in the Galaxy Training Network.

Read more about the collaboration and upcoming live workshop on the BioCommons website.

Full Story View Material

Recent News

See all news

GTN Video Library 2.0: 107 hours of learning across 154 videos

14 June 2024   gtn

Many GTN tutorials already have recordings. These recordings were made by members of the community for a variety of (online) training events. Up until now, this video library were part of the Gallantries Project. We have now integrated this video library directly into the GTN, and made it even easier to add video recordings to GTN tutorials or slide decks! Just use a Google Form to submit your video recordings!

From GTN Intern to Tutorial Author to Bioinformatician

13 June 2024   single-cell training education trajectory user contributor

With growing access and interest in sequencing data, Galaxy is a knight in shining armor for wet lab scientists hoping to analyze their own data. With long term intentions of increasing access to bioinformatic analyses, the Galaxy Training Network (GTN) creates a safe space where non-computer-scientists may analyze their own data and even learn to code: an invaluable skill in today’s scientific world. Galaxy introduced me to brand new skills as an undergraduate and ultimately changed the trajectory of my career. Here is my story as a biology undergraduate with no coding experience turned GTN contributor &, eventually, coding bioinformatician: thanks to Galaxy.